DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31030 and Atp6ap1

DIOPT Version :9

Sequence 1:NP_001036775.1 Gene:CG31030 / 318563 FlyBaseID:FBgn0051030 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_113973.2 Gene:Atp6ap1 / 83615 RGDID:620423 Length:463 Species:Rattus norvegicus


Alignment Length:464 Identity:91/464 - (19%)
Similarity:162/464 - (34%) Gaps:135/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LCLIIGSCSASISGPFIFWGHSR--------------VSSQQTQALVESSSRELPLTQLFTEAKA 60
            |..:..:.:|....|.:.|...|              .|..|....::      |..:|  ..:.
  Rat    26 LVAVAAAVAAEQQVPLVLWSSDRDLWAPVADTHEGHITSDMQLSTYLD------PALEL--GPRN 82

  Fly    61 IVVFVRNTTNRLEGTRY---------PKFQNL------------VKSGAW-------TYLPQRSL 97
            :::|:::..:..:.|.|         ..|.||            :.:..|       ||| |..|
  Rat    83 VLLFLQDKLSIEDFTAYGGVFGNKQDSAFSNLENALDLAPSSLVLPAVDWYAISTLTTYL-QEKL 146

  Fly    98 AAEP----------FGLNANIEVVSL------SGHGEEDDSEILLAYNEAVNTYGRGEVLGILGS 146
            .|.|          ..|||::..:.|      :..|.....|:|...:|.:     |:||..|.|
  Rat   147 GASPLHVDLATLKELKLNASLPALLLIRLPYTASSGLMAPREVLTGNDEVI-----GQVLSTLES 206

  Fly   147 REEEAHFLAKREAAPGGEEEEKAKAAEGSEETEASFIYVAEGNKAVLSLNGPLELRVT------- 204
             |:..:..|.....|.....:.|..|.|...      .:.:...|..:::.|:....|       
  Rat   207 -EDVPYTAALTAVRPSRVARDVAMVAGGLGR------QLLQTQVASPAIHPPVSYNDTAPRILFW 264

  Fly   205 --NDTLKLEEHIKQIT---------------FDDQRAKGYGRLSITFMHSGEK---CTLRFKFSL 249
              |.::..::..|.:|               ::|    .:..||:|:    |.   .|:.|||.|
  Rat   265 AQNFSVAYKDEWKDLTSLTFGVENLNLTGSFWND----SFAMLSLTY----EPLFGATVTFKFIL 321

  Fly   250 --------IRGSWTLRNVEVEYRELKSVLVARGDEYTLPSAPLGFSYRCSAESVNFLNPARN--- 303
                    .|..:|:..:|:...  .||......:.|.||.   :|:.|  |.|:.|:...:   
  Rat   322 ASRFYPVSARYWFTMERLEIHSN--GSVAHFNVSQVTGPSI---YSFHC--EYVSSLSKKGSLLV 379

  Fly   304 ---ETIQSLLLSDFQVQPWLNGRPEYGEVYDCIGFVSAPILAGLFVVTLLLGILGLGISAMLSMH 365
               .::..:.|.:||:|.:.....::....||.||.|..|..||.....:|.|...|:..:||:.
  Rat   380 TNVPSLWQMTLHNFQIQAFNVTGEQFSYASDCAGFFSPGIWMGLLTTLFMLFIFTYGLHMILSLK 444

  Fly   366 TPNRFESSR 374
            |.:||:..:
  Rat   445 TMDRFDDHK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31030NP_001036775.1 ATP-synt_S1 243..377 CDD:310428 37/146 (25%)
Atp6ap1NP_113973.2 ATP-synt_S1 315..461 CDD:399083 37/146 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1111170at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12471
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.