DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC45RP and vha-19

DIOPT Version :10

Sequence 1:NP_001036775.1 Gene:VhaAC45RP / 318563 FlyBaseID:FBgn0051030 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_500332.1 Gene:vha-19 / 177103 WormBaseID:WBGene00021952 Length:451 Species:Caenorhabditis elegans


Alignment Length:453 Identity:90/453 - (19%)
Similarity:148/453 - (32%) Gaps:128/453 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VSSQQTQALVESSSREL---PLTQLFTEAKA--IVVFVRNTTNRLEGTRYPKF---QNLVKSGAW 89
            ::.|...|::.|:|||:   |..:|...|.|  .|||:.|          |.|   |..||:.|:
 Worm    12 MACQAYDAVLFSNSREIGGTPAAKLVESATAEEPVVFIVN----------PDFTLGQFSVKANAY 66

  Fly    90 TYLPQRSLAAEPFGLNAN----------IEVVSLSGHGEEDD----SEILLAYNEAVNTYGR--- 137
            |..|.....|:.. .|:|          ||..........|.    |.|.:.|.|...:..:   
 Worm    67 TSEPSADYLAKSV-KNSNFHESQYFSHQIEATQAQWLSSADQYSAGSPIYIIYGEEWTSMEQLAE 130

  Fly   138 ------GEVLGILGSREEEAHFLAKREAAPGGEE----EEKAKAAEGS----------------- 175
                  ...:||:.|.:..||..:.|......:|    .|.:.|||.:                 
 Worm   131 QLISKIDNSVGIITSTDAVAHEKSSRVKRVATDEFNSDSENSAAAEANGGFPFPLVIPPYNQTFY 195

  Fly   176 ---------------------EETEASFIYVAE------------GNKAVLSLNGPLELRVTNDT 207
                                 |:.:...:|.|.            ....|...||.:...:....
 Worm   196 SVKPTNGHSCLFYLEGLTVVVEQKKEKVLYYANAYIPGSNFTWAYSETDVTCPNGTIGDFIFKIH 260

  Fly   208 LKLEEHIKQITFDDQRAKGYGRLSITFMHSGEKCTLRFKFS-LIRGSWTLRNVEVE------YRE 265
            |.||..|..:       :|..:.:.| |..|:|......|: .:.|.|.|......      |..
 Worm   261 LTLENDITGM-------QGTSKKAFT-MKKGDKIDFDLTFTGDLFGYWALNKASASNLAISGYDP 317

  Fly   266 LKS-------VLVARGDEYTLPSAPLGFSYRCSAESVNFLNPARNETIQ-SLLLSDFQVQ----- 317
            .||       |:.....:||..::..|:|..|......|. |...:::: .:.|.:.|:|     
 Worm   318 YKSASVDGSKVVNGSATQYTKLNSVAGWSLACGQSQAVFF-PTNEQSVRIGVALMNTQIQLFNYQ 381

  Fly   318 ---PWLNGRPEYGEVYDCIGFVSAPILAGLFVVTLLLGILGLGISAMLSMHTPNRFESSRSKQ 377
               .|:.......:..||.|..|:....|:....:|:..|..|...:.|:.|.:||:..:.:|
 Worm   382 NPEKWVESAHFTLQTEDCTGTFSSGSWMGIVSALVLIAGLMFGYVMLQSVQTMDRFDDPKQRQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC45RPNP_001036775.1 Lamp <242..319 CDD:480752 18/99 (18%)
vha-19NP_500332.1 Ac45-VOA1_TM 401..439 CDD:466669 10/37 (27%)

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