DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12106 and Commd3

DIOPT Version :10

Sequence 1:NP_572536.1 Gene:CG12106 / 31856 FlyBaseID:FBgn0030100 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_942027.1 Gene:Commd3 / 291339 RGDID:735116 Length:195 Species:Rattus norvegicus


Alignment Length:197 Identity:52/197 - (26%)
Similarity:82/197 - (41%) Gaps:16/197 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ISPTVVAGLKNL---GAIISLPLTKLLIA--NSLKLTLHPDATIAPVPELYAKNAACAKQSEYAV 80
            :|..|..|::.|   |:..|.....||.|  .|| |....|......|:|...:....|....|.
  Rat     3 LSEYVQRGIQTLADPGSFDSSAFALLLRAAFQSL-LDAQADEAALDHPDLKHIDPVVLKHCHGAA 66

  Fly    81 VTLFALGTKHGWDGLQLRQQLEQLNLDAAAVDELSRVYEDSRKDLILRQLQIGHSFPHITDIQWR 145
            .|......||..|...|...||....|...::.....|::::..|.:....||.:.|||||:.||
  Rat    67 ATYILEAGKHRVDKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRALPHITDVSWR 131

  Fly   146 IVCDVKSST--SDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLINRLKE----IERH 204
            :...:|::.  ..|..|   :.:.| |...:..:....:.|.|:.|:||.|:.:||:    :||.
  Rat   132 LEYQIKTNQLHKMCRPG---YLVTL-NVENADSQSYPEISFSCSMEQLQDLVGKLKDASKSLERA 192

  Fly   205 CQ 206
            .|
  Rat   193 TQ 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12106NP_572536.1 Commd3 112..210 CDD:240099 27/101 (27%)
Commd3NP_942027.1 Commd3 98..194 CDD:240099 26/99 (26%)

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