DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31008 and chchd10

DIOPT Version :9

Sequence 1:NP_733411.1 Gene:CG31008 / 318554 FlyBaseID:FBgn0051008 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_957078.1 Gene:chchd10 / 393757 ZFINID:ZDB-GENE-040426-1753 Length:143 Species:Danio rerio


Alignment Length:133 Identity:44/133 - (33%)
Similarity:61/133 - (45%) Gaps:25/133 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRKQRS----ASVKAGSTNYMP--------AVVPTVTNSEM--VFKEAAAHAVGVAAGSVVGHA 51
            |.|..||    |...|.:.:|.|        ||.|.....:.  :..:.|..|.|||.||.|||.
Zfish     1 MARGSRSRPSPAPASAPAPSYAPAPAAPPPMAVAPAAAQPKQPGLMAQMATTAAGVAVGSAVGHV 65

  Fly    52 IGSGITGLFRRRD-----------QQPHHSDLVEEGPCAKEMKEFLKCTEDNDDLSVCKEFNDAV 105
            :||.|||.|....           |:|......:.|||..|:::||.|.....|||:|:.||:|:
Zfish    66 MGSAITGAFSGGSSSEAPKPAPTYQEPSRLPPSQSGPCLFEVRQFLDCATTQADLSLCEGFNEAL 130

  Fly   106 RRC 108
            ::|
Zfish   131 KQC 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31008NP_733411.1 CHCH 78..111 CDD:284221 13/31 (42%)
chchd10NP_957078.1 CHCH 103..134 CDD:284221 13/31 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4090
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.870

Return to query results.
Submit another query.