DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31008 and chchd2

DIOPT Version :9

Sequence 1:NP_733411.1 Gene:CG31008 / 318554 FlyBaseID:FBgn0051008 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_957061.1 Gene:chchd2 / 393740 ZFINID:ZDB-GENE-040426-1737 Length:168 Species:Danio rerio


Alignment Length:161 Identity:42/161 - (26%)
Similarity:66/161 - (40%) Gaps:53/161 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRKQRSASVK---------------AGSTNYMPAVVP-----------TVTNSEMVFKEAAAHA 39
            |||..||.:.:               |...:|.||..|           .......:|.:.|:.|
Zfish     1 MPRGSRSRTSRMSPPSYSSPAPMARAAPPRSYAPAPAPPPPSAVAPPAAAAPRQPGMFAQMASTA 65

  Fly    40 VGVAAGSVVGHAIGSGITGLF--------------------------RRRDQQP-HHSDLVEEGP 77
            .|||.||.|||.||..:||.|                          .::.||| :..|..::.|
Zfish    66 AGVAVGSAVGHTIGHAMTGGFGGGGHSEAARPDVTYQEPYQGQAMYPPQQQQQPMYQQDPQQQNP 130

  Fly    78 CAKEMKEFLKCTEDNDDLSVCKEFNDAVRRC 108
            |:.|||:|::|.:...||.:|:.|::.:::|
Zfish   131 CSYEMKQFIECAQSQSDLKLCEGFSEVLKQC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31008NP_733411.1 CHCH 78..111 CDD:284221 11/31 (35%)
chchd2NP_957061.1 CHCH 131..162 CDD:284221 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4090
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.870

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