DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gskt and gsk3bb

DIOPT Version :9

Sequence 1:NP_733426.1 Gene:gskt / 318552 FlyBaseID:FBgn0046332 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001139160.1 Gene:gsk3bb / 557882 ZFINID:ZDB-GENE-090312-2 Length:419 Species:Danio rerio


Alignment Length:396 Identity:248/396 - (62%)
Similarity:307/396 - (77%) Gaps:15/396 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NKVTTVVATNAFGADVMSEISYTDAKVVGNGSFGVVFQAKMVPSNEMVAIKKVLQDRRFKNRELQ 76
            :|||||.||...|.|...|:||||.||:||||||||:|||:..:.|:|||||||||:||||||||
Zfish    35 SKVTTVAATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDTGELVAIKKVLQDKRFKNRELQ 99

  Fly    77 IMRKLRHDNIITLKWFFFSSGEKRDEVYLNLVMEFLPETLYKVERQYARAKQTLPVNFVRLYMYQ 141
            |||||.|.||:.|::||:|||:|:|||||||||:::||.:|:|.|.|::|||.||:.:|:|||||
Zfish   100 IMRKLDHCNIVRLRYFFYSSGDKKDEVYLNLVMDYVPENVYRVARHYSKAKQNLPMVYVKLYMYQ 164

  Fly   142 LLRSMGYLHSLGFCHRDIKPQNMLLDSETGVLKLCDFGSAKQLISGEPNVSYICSRYYRAPELIF 206
            |.||:.|:||.|.|||||||||:|||.||.|||||||||||||:.||||||||||||||||||||
Zfish   165 LFRSLAYIHSYGICHRDIKPQNLLLDPETAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229

  Fly   207 GSTDYTTKIDMWSAGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSEQLHDMNPHYKQFKLP 271
            |:||||:.||:||||||::||||||.||||||||||:|||:||:||||.||:.:|||:|.:||.|
Zfish   230 GATDYTSSIDIWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP 294

  Fly   272 ELKPHPWSKVFRIRTPAEAIDLVSKMLIYSPNARVSPLMGCAHPFFDELRQDPHQQLPNGRSLPP 336
            ::|.|||:||||.|||.|||.|.|::|.|:|.||::||..|||.|||||| :|:.:|||||..|.
Zfish   295 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHTFFDELR-EPNLKLPNGRERPV 358

  Fly   337 LFNFTDYEKTIEPDTMPLLLP---RAQGSSTTKEPSAAHRNRNTAGEESPRKTEDSQKPATAALS 398
            |||||..|.:..|....:|:|   :.|..::|:..|||     |......|...      |.|.|
Zfish   359 LFNFTTQELSNNPSLASVLIPAHAQNQAENSTQSASAA-----TGANSGDRGLN------TNAAS 412

  Fly   399 KSPGPS 404
            .:|.||
Zfish   413 AAPNPS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsktNP_733426.1 STKc_GSK3 30..320 CDD:271039 207/289 (72%)
S_TKc 33..317 CDD:214567 202/283 (71%)
gsk3bbNP_001139160.1 STKc_GSK3 51..343 CDD:271039 207/291 (71%)
Pkinase 56..340 CDD:278497 202/283 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580565
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0658
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D990896at2759
OrthoFinder 1 1.000 - - FOG0000635
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100482
Panther 1 1.100 - - O PTHR24057
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X378
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.710

Return to query results.
Submit another query.