DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12056 and MAPR3

DIOPT Version :9

Sequence 1:NP_572535.1 Gene:CG12056 / 31855 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_190458.1 Gene:MAPR3 / 824050 AraportID:AT3G48890 Length:233 Species:Arabidopsis thaliana


Alignment Length:247 Identity:58/247 - (23%)
Similarity:91/247 - (36%) Gaps:43/247 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FVVAAVLGGIYHTEIRQFLRRQT--DNYLDQAGQDASIPLAFQAGDDIGTLFTPAELAKFNGEEE 77
            |.|.|:...:|......|:..:.  ...|:...|...:|...|.|:     .|..||..::|.:.
plant    25 FTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEPLPPPVQLGE-----ITEEELKLYDGSDS 84

  Fly    78 GRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSFISGDFETYDPETADDVLTLKPDDLI 142
            .:||.:|:.|.::|||:....||.|..|..|.|:|||.:.....||  |.:...|:..|...:|.
plant    85 KKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE--DQDLTGDISGLGAFELE 147

  Fly   143 GLAGWRDFYQKDYVYKGRVIGRFYDEKGALTTYHHKFLELLEQARDAKRQVEELRARYPGCNIEW 207
            .|..|...:...||    .:|....:.|              :.:::....|...|...|.:   
plant   148 ALQDWEYKFMSKYV----KVGTIQKKDG--------------EGKESSEPSEAKTASAEGLS--- 191

  Fly   208 SEERGTRVWCTTTSGDGKERSWIGYPRKLYSRGNKSFQCACVPDAELDEIDA 259
                      |.|   |:|.|.|.:.....|.|.|..:.....|...|:.||
plant   192 ----------TNT---GEEASAITHDETSRSTGEKIAETTEKKDVATDDDDA 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12056NP_572535.1 Cyt-b5 63..>117 CDD:278597 20/53 (38%)
MAPR3NP_190458.1 Cyt-b5 72..>133 CDD:395121 23/62 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1110
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.