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Protein Alignment CG12056 and vem-1
DIOPT Version :9
Sequence 1: | NP_572535.1 |
Gene: | CG12056 / 31855 |
FlyBaseID: | FBgn0030099 |
Length: | 287 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001024770.1 |
Gene: | vem-1 / 181066 |
WormBaseID: | WBGene00006890 |
Length: | 183 |
Species: | Caenorhabditis elegans |
Alignment Length: | 164 |
Identity: | 39/164 - (23%) |
Similarity: | 73/164 - (44%) |
Gaps: | 36/164 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 FQF-----LFVVAAVLGGIYHTEIRQFLRRQTDNYLDQAGQDASIPLAFQAGDDIGTLFTPAELA 70
|:| :|:| .|||..:: :|.|..........:.|.:|:: |: |..||.
Worm 7 FEFTMYDAVFLV-VVLGFFFY-----WLTRSEQPLPAPPKELAPLPMS-----DM----TVEELR 56
Fly 71 KFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSF-------ISGDFETYDPE 128
|::|.:....|: .|.|:::||:||...||.|.:|....|.||:.:. :|.:::.:...
Worm 57 KYDGVKNEHILF-GLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQNAVSSEWDDHTGI 120
Fly 129 TADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVI 162
:||:..|... |...::..|:..||::
Worm 121 SADEQETANE--------WETQFKFKYLTVGRLV 146
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG12056 | NP_572535.1 |
Cyt-b5 |
63..>117 |
CDD:278597 |
19/53 (36%) |
vem-1 | NP_001024770.1 |
Cyt-b5 |
51..>106 |
CDD:306642 |
19/55 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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