| Sequence 1: | NP_001091674.1 | Gene: | HNRNPF / 3185 | HGNCID: | 5039 | Length: | 415 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_650120.1 | Gene: | glo / 41431 | FlyBaseID: | FBgn0259139 | Length: | 586 | Species: | Drosophila melanogaster |
| Alignment Length: | 567 | Identity: | 156/567 - (27%) |
|---|---|---|---|
| Similarity: | 225/567 - (39%) | Gaps: | 200/567 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Human 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTR-EGRQSGEAFVELGSEDDVKMALKKDRE 76
Human 77 SMGHRYIEVFKSHRTE-MDWVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPN- 139
Human 140 -GITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMS 203
Human 204 VQRPGPYD-------RPGT------------------ARRYIGIVKQAGLERMRPGAYSTGYGGY 243
Human 244 EEYSGLSDG-----------YGFTTDLFGRDLSYCLSGMYDH----------------------- 274
Human 275 ------------------------------------------------------RYGDSEF---- 281
Human 282 ---TVQSTTG-----------------------------------------HCVHMRGLPYKATE 302
Human 303 NDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELFLNSTTGA 367
Human 368 SNGAYSSQVMQGMGVSAAQATYSGLESQSVSGCYGAGYSGQNSMGGY 414 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HNRNPF | NP_001091674.1 | RRM1_hnRNPH_hnRNPH2_hnRNPF | 10..88 | CDD:410128 | 36/75 (48%) |
| Interaction with RNA | 81..86 | 4/4 (100%) | |||
| RRM2_hnRNPH_hnRNPH2_hnRNPF | 103..192 | CDD:410130 | 45/90 (50%) | ||
| Interaction with RNA | 179..184 | 4/4 (100%) | |||
| zf-RNPHF | 255..290 | CDD:369688 | 11/159 (7%) | ||
| RRM3_hnRNPH_CRSF1_like | 289..363 | CDD:409929 | 33/73 (45%) | ||
| Interaction with RNA | 355..360 | 4/4 (100%) | |||
| glo | NP_650120.1 | RRM_SF | 51..125 | CDD:302621 | 34/73 (47%) |
| RRM2_hnRNPH_like | 146..224 | CDD:240948 | 41/77 (53%) | ||
| RRM3_hnRNPH_CRSF1_like | 481..555 | CDD:240950 | 33/73 (45%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165155218 | |
| Domainoid | 1 | 1.000 | 78 | 1.000 | Domainoid score | I8778 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG4211 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 243 | 1.000 | Inparanoid score | I3313 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D392876at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000855 | |
| OrthoInspector | 1 | 1.000 | - | - | otm42118 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102542 | |
| Panther | 1 | 1.100 | - | - | O | PTHR13976 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4231 |
| SonicParanoid | 1 | 1.000 | - | - | X436 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 12 | 11.830 | |||||