DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3.3B and Cenpa

DIOPT Version :10

Sequence 1:NP_511095.1 Gene:His3.3B / 31848 FlyBaseID:FBgn0004828 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_001408377.1 Gene:Cenpa / 12615 MGIID:88375 Length:146 Species:Mus musculus


Alignment Length:138 Identity:59/138 - (42%)
Similarity:80/138 - (57%) Gaps:21/138 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PRKQLATKAARKSAPSTGGVKKPH-------------------RYRPGTVALREIRRYQKSTELL 62
            ||::..|...|.|:|:.|..::..                   |.|...:.|:||:..||||:||
Mouse     3 PRRKPQTPRRRPSSPAPGPSRQSSSVGLRIERRALCVQGSQTLRRRQKFMWLKEIKTLQKSTDLL 67

  Fly    63 IRKLPFQRLVREIAQDFK--TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDI 125
            .||.||..:||||.:.|.  .|..:|:.|:.|||||:||:|:.||||..|.::||.|||:.||||
Mouse    68 FRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDI 132

  Fly   126 QLARRIRG 133
            ||.|||||
Mouse   133 QLTRRIRG 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3.3BNP_511095.1 PTZ00018 1..136 CDD:185400 59/138 (43%)
CenpaNP_001408377.1 H3 41..143 CDD:128705 52/100 (52%)

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