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Protein Alignment His3.3B and Cenpa
DIOPT Version :9
Sequence 1: | NP_001259374.1 |
Gene: | His3.3B / 31848 |
FlyBaseID: | FBgn0004828 |
Length: | 136 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011239001.1 |
Gene: | Cenpa / 12615 |
MGIID: | 88375 |
Length: | 146 |
Species: | Mus musculus |
Alignment Length: | 138 |
Identity: | 59/138 - (42%) |
Similarity: | 80/138 - (57%) |
Gaps: | 21/138 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 PRKQLATKAARKSAPSTGGVKKPH-------------------RYRPGTVALREIRRYQKSTELL 62
||::..|...|.|:|:.|..::.. |.|...:.|:||:..||||:||
Mouse 3 PRRKPQTPRRRPSSPAPGPSRQSSSVGLRIERRALCVQGSQTLRRRQKFMWLKEIKTLQKSTDLL 67
Fly 63 IRKLPFQRLVREIAQDFK--TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDI 125
.||.||..:||||.:.|. .|..:|:.|:.|||||:||:|:.||||..|.::||.|||:.||||
Mouse 68 FRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDI 132
Fly 126 QLARRIRG 133
||.|||||
Mouse 133 QLTRRIRG 140
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
His3.3B | NP_001259374.1 |
PTZ00018 |
1..136 |
CDD:185400 |
59/138 (43%) |
Cenpa | XP_011239001.1 |
H3 |
41..143 |
CDD:128705 |
52/100 (52%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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