DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-1gamma and alpha-ADR

DIOPT Version :9

Sequence 1:NP_788891.2 Gene:AP-1gamma / 31842 FlyBaseID:FBgn0030089 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_001330969.1 Gene:alpha-ADR / 832340 AraportID:AT5G22770 Length:1012 Species:Arabidopsis thaliana


Alignment Length:1005 Identity:249/1005 - (24%)
Similarity:424/1005 - (42%) Gaps:213/1005 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TRLRDL---IRQIRAARTAAEERAVVNKECAYIRSTFREE---------DSVWRCRNIAKLLYIH 98
            |.:|.|   |..:|..:....||..|:||...||:.|:.|         ..||      |:||||
plant     2 TGMRGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPYKKKKYVW------KMLYIH 60

  Fly    99 MLGYPAHFGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLA 163
            ||||...||.:|.:.|.::.::.:|::||:....||:|..|...|..|.::||:....:....||
plant    61 MLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETFQCLA 125

  Fly   164 LCTLGAIASPEMARDLASEVERLM--KSPNTYIRKKATLCAFRVIRRVPELMEIFLPATR--SLL 224
            |..:|.|...:.|..||.:|::|:  .|....:||||.||..|:.|:.|:.:.:...|.|  .||
plant   126 LTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLL 190

  Fly   225 SEKNHGILITGVTLITEMCENSSDTLMHFKKDSGNREIVPNLVRILKNLILGGYSP-EHDVSGVS 288
            .|::.|:|.:..:|:..:..|:.:..         ...:|..|:||:.|......| |:...|:.
plant   191 DERDLGVLTSSTSLLVALVSNNHEAY---------SSCLPKCVKILERLARNQDVPQEYTYYGIP 246

  Fly   289 DPFLQVKILRLLRILGH-NDPDASEAMNDILAQVATNTETSKNV-----GNTILYETVLSIMDIR 347
            .|:||||.:|.|:.... .||...:|:.::|.::...|:..|||     .:.:|:|.:..:|.:.
plant   247 SPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVLFEALSLVMHLD 311

  Fly   348 SEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHAD--TSAVQRHRTTILECLKDPDVSIRR 410
            :|..:....|.:||:|:...:.||||:.|..:.|.:...  ...:::|::.|:..|||||:||||
plant   312 AEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRR 376

  Fly   411 RAMELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIA 475
            ||::|.:.:.:..|.:.:.:|||.:|..|:...:.:.|....:.||:::|...|::|..|.::..
plant   377 RALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEKFAPDLSWYVDVILQLIDK 441

  Fly   476 AGNYVRDDVVSSTIQLVSSSPVPEQTYITNRFWESL-QVANHCEDKQPLLQVAVWAIGEYGDLFM 539
            ||::|.||:....:|.|:::. ..|.|..::..|.| ::|.|    :.:::|:.:.:||||.|..
plant   442 AGDFVSDDIWFRVVQFVTNNE-DLQPYAASKAREYLDKIAIH----ETMVKVSAYILGEYGHLLA 501

  Fly   540 YGANEDEFERP--TESDLIAVYYKFLTSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQ----ALI 598
                    .:|  :.|:|.::.::.|.:  :||.:....|.:.|||....|....|:|    |:.
plant   502 --------RQPGCSASELFSILHEKLPT--ISTPTIPILLSTYAKLLMHAQPPDPELQKKVWAVF 556

  Fly   599 TSFGSHLNVDLQQRGVEFTQLFGHYKHLRPPLLE--KMPAMQISRISSQNGESGGGSFDDNSPDV 661
            ..:.|.::|::|||.||:.:|..........|.|  |.|..|.|.|...          :|..|.
plant   557 KKYESCIDVEIQQRAVEYFELSKKGPAFMDVLAEMPKFPERQSSLIKKA----------ENVEDT 611

  Fly   662 IENGVEGGGGGGHSLIESNMNTLGDNTNILLD---------------LLGSTDLSAGGAGDLVAA 711
            .:          .|.|:........|..:|.|               |.||||..:       .|
plant   612 AD----------QSAIKLRAQQQPSNAMVLADQQPVNGAPPPLKVPILSGSTDPES-------VA 659

  Fly   712 TDLSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSSTTTGAPAGGGGGGGIVALVGDNNQ 776
            ..||:    .|...:|  :.|.:.:.|||.    ||..|.:..  ||.|                
plant   660 RSLSH----PNGTLSN--IDPQTPSPDLLS----DLLGPLAIE--APPG---------------- 696

  Fly   777 SSAANMNNMLGGLDLGGFGSGLDSSASIP----TNGNDLASML------------GGLGAPPAAS 825
               |..|...|.:...|....:|.||.:|    ||..:|...:            |.|...|...
plant   697 ---AVSNEQHGPVGAEGVPDEVDGSAIVPVEEQTNTVELIGNIAERFHALCLKDSGVLYEDPHIQ 758

  Fly   826 PSLAASAPVGNLIDGHAGSLL-----ADLNPTAASNNVVVPPQGPRLTALDKDGLLVQLVSVRGS 885
            ..:.|.      ..||.|.|:     .:.:|..:...:::||...||                  
plant   759 IGIKAE------WRGHHGRLVLFMGNKNTSPLTSVQALILPPAHLRL------------------ 799

  Fly   886 DCMRIYMTTTNNSDNTLDQYLLQAAVQRSFQLQMLTPSGSVLP-------PGGVITQEMRVVATS 943
                       :.....|....:|.||...::..:.||..|..       ...|::.::|:.||.
plant   800 -----------DLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGANVVSAKLRIPATL 853

  Fly   944 NATLRMRLRIQYVLDGQQQVEQTEVSGFPE 973
            |..|             |.::.|....||:
plant   854 NKFL-------------QPLQLTSEEFFPQ 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1gammaNP_788891.2 Adaptin_N 68..624 CDD:279882 167/584 (29%)
Alpha_adaptinC2 869..972 CDD:197886 15/109 (14%)
alpha-ADRNP_001330969.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4354
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53727
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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