DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1gamma and Ap1g2

DIOPT Version :9

Sequence 1:NP_788891.2 Gene:AP-1gamma / 31842 FlyBaseID:FBgn0030089 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_031481.2 Gene:Ap1g2 / 11766 MGIID:1328307 Length:791 Species:Mus musculus


Alignment Length:937 Identity:411/937 - (43%)
Similarity:538/937 - (57%) Gaps:168/937 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RLRDLIRQIRAARTAAEERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGYPAHFGQLEC 111
            ||:|||.:||.|:|.|:||.|:.||||.||::||:.|.:.|.|.:|||||:|||||||||||:||
Mouse     7 RLQDLIEEIRGAKTQAQEREVIQKECAQIRASFRDGDPLQRHRQLAKLLYVHMLGYPAHFGQMEC 71

  Fly   112 LKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAIASPEMA 176
            |||.||.||||||:||||||||||||.|.||||||.:||||:...|.|.|||||||..:.|.||.
Mouse    72 LKLIASPRFTDKRVGYLGAMLLLDERHDSHLLITNSIKNDLSQGNQPVQGLALCTLSTMGSAEMC 136

  Fly   177 RDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELMEIFLPATRSLLSEKNHGILITGVTLITE 241
            ||||.|||:|:..|:.|:||||.|.|..:||:.|||..||||....||.|::|||.:..||||||
Mouse   137 RDLAPEVEKLLLQPSPYVRKKAILTAVHMIRKDPELSGIFLPPCTKLLRERHHGIQLGTVTLITE 201

  Fly   242 MCENSSDTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLLRILGHN 306
            :||.:...|.||:|      :||.||:||:.|:..|||.||.:||||||||||:|||||||||.|
Mouse   202 LCERNPAALRHFRK------VVPQLVQILRTLVTTGYSTEHSISGVSDPFLQVQILRLLRILGRN 260

  Fly   307 DPDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNI 371
            ..::||.|||:||||||||:||:|.||.:|.||||:||.|.|..||||||||||||||||:||||
Mouse   261 HEESSETMNDLLAQVATNTDTSRNAGNAVLLETVLTIMAIHSAAGLRVLAVNILGRFLLNNDKNI 325

  Fly   372 RYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINAQNIRTMTKELLLFL 436
            |||||.:||:.|.:|.|||||||:|::|||::.|.|:.|||:|||.||:|:.|:|.|.:||..||
Mouse   326 RYVALTSLLQLVQSDHSAVQRHRSTVVECLQETDASLSRRALELSLALVNSSNVRAMMQELQAFL 390

  Fly   437 EKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQ- 500
            |....:.:|.|:||::|||||::|:.|||:||.|.||..||.:||||.|::..||:..:   |: 
Mouse   391 ESCPPDLRADCASGILLAAERFAPSKRWHIDTILHVLTTAGAHVRDDAVANLTQLIGEA---EEL 452

  Fly   501 -TYITNRFWESLQVANHCED--KQPLLQVAVWAIGEYGDLFMYG-ANEDEFERPTESDLIAVYYK 561
             ||...|.:.:|     .||  :|||:|||.|.|||||||.:.| ..|.|..:..|.|::|:..|
Mouse   453 HTYSVRRLYSAL-----AEDISQQPLVQVAAWCIGEYGDLLLEGNCEETEPFQVEEEDVLALLEK 512

  Fly   562 FLTSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRGVEFTQLFGHYKHL 626
            .|.|......::.||:.:|.||||||:.....|:.:::.:||.::::||||.||:..||..|.|:
Mouse   513 VLQSHMSLPATRGYAITALMKLSTRLRGDNNRIRQVVSIYGSCVDLELQQRAVEYNTLFQKYDHM 577

  Fly   627 RPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIENGVEGGGGGGHSLIESNMNTLGDNTNI- 690
            |..:|||||.:          |.|       .|.|.|.|.|.........:.:...|....|.: 
Mouse   578 RAAILEKMPLV----------ERG-------DPHVKEGGKEKQTEAQPLEVTAPAPTEPQATKLL 625

  Fly   691 -LLDLLGSTD--LSAGGAGDLVAATDLSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSS 752
             ||||||.|.  ||:|.|..|...|.                    |..:.|:.||||..:.|  
Mouse   626 DLLDLLGDTSEPLSSGHAQHLPPQTP--------------------SPGEALIHLLDLPCTPP-- 668

  Fly   753 TTTGAPAGGGGGGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLASMLGG 817
                                                                             
Mouse   669 ----------------------------------------------------------------- 668

  Fly   818 LGAPPAASPSLAASAPVGNLIDGHAGSLLADLNPTAASNNVVVPPQGPRLTALDKDGLLVQLVSV 882
               |||..||:......|..:|      |:.:.|                  |:...||:     
Mouse   669 ---PPAPIPSVRVFEREGLQLD------LSFMRP------------------LETPALLL----- 701

  Fly   883 RGSDCMRIYMTTTNNSDNTLDQYLLQAAVQRSFQLQMLTPSGSVLP-PGGV-ITQEMRVVATSNA 945
                   :..||||:|...:..::.||||.:|||||:..|||:.:| .||: |||..|::..:.|
Mouse   702 -------VTATTTNSSKEDVTHFVCQAAVPKSFQLQLQAPSGNTIPAQGGLPITQVFRILNPNQA 759

  Fly   946 TLRMRLRIQYVLDGQQQVEQTEVSGFP 972
            .||::||:.|...||...|..||...|
Mouse   760 PLRLKLRLTYNHSGQPVQEIFEVDNLP 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1gammaNP_788891.2 Adaptin_N 68..624 CDD:279882 313/560 (56%)
Alpha_adaptinC2 869..972 CDD:197886 38/104 (37%)
Ap1g2NP_031481.2 Adaptin_N 24..575 CDD:279882 316/564 (56%)
Alpha_adaptinC2 678..786 CDD:197886 42/143 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845815
Domainoid 1 1.000 713 1.000 Domainoid score I116
eggNOG 1 0.900 - - E1_COG4354
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 769 1.000 Inparanoid score I538
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53727
OrthoDB 1 1.010 - - D250202at2759
OrthoFinder 1 1.000 - - FOG0002071
OrthoInspector 1 1.000 - - otm42734
orthoMCL 1 0.900 - - OOG6_101228
Panther 1 1.100 - - O PTHR22780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2030
SonicParanoid 1 1.000 - - X1368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.800

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