DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1gamma and ap1g1

DIOPT Version :9

Sequence 1:NP_788891.2 Gene:AP-1gamma / 31842 FlyBaseID:FBgn0030089 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_017948994.1 Gene:ap1g1 / 100380050 XenbaseID:XB-GENE-983618 Length:824 Species:Xenopus tropicalis


Alignment Length:946 Identity:473/946 - (50%)
Similarity:606/946 - (64%) Gaps:142/946 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RMPTPTRLRDLIRQIRAARTAAEERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGYPAH 105
            |||.|.|||:|||.||.|||.||||.::.||||.|||:|||||:.:||||:|||||:||||||||
 Frog     6 RMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAH 70

  Fly   106 FGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAI 170
            |||||||||.||.:||||||||||||||||||||||||:|||:|||||.|||:|.||||||||.:
 Frog    71 FGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCM 135

  Fly   171 ASPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELMEIFLPATRSLLSEKNHGILITG 235
            .|.||.||||.|||:|:|:.|:|:||||.|||..|||:||||||:|||||::||:|||||:|.|.
 Frog   136 GSAEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTS 200

  Fly   236 VTLITEMCENSSDTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLL 300
            |.|:|||||.|.|.|.||:|   |.::||.|||||||||:.||||||||||:|||||||:|||||
 Frog   201 VVLLTEMCERSPDMLTHFRK---NEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLL 262

  Fly   301 RILGHNDPDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLL 365
            ||||.||.|:|||||||||||||||||||||||.|||||||:||||:||.||||||:||||||||
 Frog   263 RILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLL 327

  Fly   366 NSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINAQNIRTMTK 430
            |:|||||||||.:||:||..|.:||||||:||::||||.||||:||||||||||:|..|||.|.|
 Frog   328 NNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMK 392

  Fly   431 ELLLFLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSS 495
            |||.||:..:.||||.|:||:.||||:|:|:.|||:||.:.||..||:|||||.|.:.|||:::|
 Frog   393 ELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNS 457

  Fly   496 PVPEQTYITNRFWESLQVANHCED--KQPLLQVAVWAIGEYGDLFMYG-ANEDEFERPTESDLIA 557
            ....: |...:.::::     .:|  :|||:||..|.|||||||.:.| ..|:|..:.||.:::.
 Frog   458 SEMHE-YTVQKLYKAI-----LDDISQQPLVQVCSWCIGEYGDLLVSGQCEEEEPIQVTEDEVLD 516

  Fly   558 VYYKFLTSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRGVEFTQLFGH 622
            :....|.|...::.::.:||.::.|.|||....|..|:.:::.:||.::|:||||.||:..||..
 Frog   517 ILESILISNMSTSVTRGFALTAIMKNSTRFNNTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKK 581

  Fly   623 YKHLRPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIENGVEGGGGGGHSLIESNMNTLGDN 687
            |.|:||.|||:||.|:                     ..:.||..       .|.::|       
 Frog   582 YDHMRPALLERMPIME---------------------KALTNGPT-------DLAQTN------- 611

  Fly   688 TNILLDLLGSTDLSAGGAGDLVAATDLSNAVHKKNSRNANDVVAPVSNNQDLLDLL---DLDLSA 749
                    |.||         .|..|         |:....:..|.|...||||||   |:.|..
 Frog   612 --------GETD---------PAVID---------SKPVQSIQQPSSQANDLLDLLGGNDIQLVI 650

  Fly   750 PSSTTTGAPAGGGGGGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLASM 814
            |::..| .||..||                 .:.::||.|:|.|                     
 Frog   651 PTAHPT-KPASVGG-----------------ELLDLLGDLNLSG--------------------- 676

  Fly   815 LGGLGAPPAASPSLAASAPVGNLIDGHAGS-LLADLNPTAASNNVVVPPQGPRLTALDKDGLLVQ 878
                  .|||.|.:.|..   .|:||.:|. |..|::.        :||    :||.:|:||.:.
 Frog   677 ------TPAAVPQMPAPQ---LLLDGLSGQPLFNDISG--------IPP----ITAYNKNGLKID 720

  Fly   879 LVSVRGSDCMRIYMTTT---NNSDNTLDQYLLQAAVQRSFQLQMLTPSGSVLPP--GGVITQEMR 938
            ....|.|....|.:.||   |.:|:.:..::.||||.::||||:|:||.:|||.  .|.|||.::
 Frog   721 FSFERSSTNASITVITTQASNCTDSDMTDFVFQAAVPKTFQLQLLSPSSNVLPAFNAGSITQVIK 785

  Fly   939 VVATSNATLRMRLRIQYVLDGQQQVEQTEVSGFPEQ 974
            |:......||||:::.|...|....:..|||.||.|
 Frog   786 VLNPQKQQLRMRIKLTYNHKGSAIQDLAEVSNFPPQ 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1gammaNP_788891.2 Adaptin_N 68..624 CDD:279882 357/558 (64%)
Alpha_adaptinC2 869..972 CDD:197886 39/107 (36%)
ap1g1XP_017948994.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 703 1.000 Domainoid score I124
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H47995
Inparanoid 1 1.050 767 1.000 Inparanoid score I539
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250202at2759
OrthoFinder 1 1.000 - - FOG0002071
OrthoInspector 1 1.000 - - otm47838
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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