DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1gamma and ap1g2

DIOPT Version :9

Sequence 1:NP_788891.2 Gene:AP-1gamma / 31842 FlyBaseID:FBgn0030089 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_012817266.2 Gene:ap1g2 / 100124756 XenbaseID:XB-GENE-995680 Length:787 Species:Xenopus tropicalis


Alignment Length:939 Identity:386/939 - (41%)
Similarity:534/939 - (56%) Gaps:165/939 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MPTPTRLRDLIRQIRAARTAAEERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGYPAHF 106
            |..|.:|.:|||.||:.:|..|||.|:.:|||.|||:||:|||::|.|::|||||:|||||||||
 Frog     1 MGPPLKLHELIRAIRSVKTQNEEREVIQRECADIRSSFRDEDSLYRGRSLAKLLYVHMLGYPAHF 65

  Fly   107 GQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAIA 171
            ||:|||||.||::||||||||||||:|||||||.||||||.:|.||..|:..|.|||||||..:.
 Frog    66 GQMECLKLIASSKFTDKRIGYLGAMMLLDERQDAHLLITNSMKRDLEHSSPVVQGLALCTLACLG 130

  Fly   172 SPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELMEIFLPATRSLLSEKNHGILITGV 236
            |.||.||||.|||.|:::...:::|||.|||..:||:||||:|:|:|.:..||.||.||:|...|
 Frog   131 STEMCRDLAGEVEHLLQNSTGHVKKKAVLCAVHIIRKVPELVEMFVPVSEELLGEKRHGVLYGAV 195

  Fly   237 TLITEMCENSSDTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLLR 301
            .|:||:|....:....|:|      ::|.|::.|:. ::.||||:|.||||:||||||::||||:
 Frog   196 LLVTEICRRQPEACKRFRK------LLPLLLQKLRQ-VMSGYSPDHVVSGVTDPFLQVRLLRLLK 253

  Fly   302 ILGHNDPDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLN 366
            |||.||....:||:|:||||:|.|:|..|.||::||||||:|:|.:|..|||||||||||||||:
 Frog   254 ILGQNDESVCDAMSDLLAQVSTCTDTQSNAGNSVLYETVLTIVDTKSASGLRVLAVNILGRFLLS 318

  Fly   367 SDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINAQNIRTMTKE 431
            ||||||||||.:|.|.|.:|.:||||||.||:|||:..|.|:.::|:||.|||:|..||..|.||
 Frog   319 SDKNIRYVALTSLNRLVQSDYAAVQRHRGTIVECLRQTDTSLNKKALELCFALVNETNILPMMKE 383

  Fly   432 LLLFLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSP 496
            |..||:....|.|.||:||:.|.|||:||:||||:||.:..|:.||..||||.||..|.|:|.:.
 Frog   384 LQRFLQTCPLELKQQCTSGIFLCAERFSPSTRWHIDTIMGTLVTAGESVRDDAVSHLIHLISGAS 448

  Fly   497 VPEQTYITNRFWESLQVANHCEDKQPLLQVAVWAIGEYGDLFMYGANEDEFERPTESDLIAVYYK 561
             ....||.:|.:  |.|:... .:|||:|||.|.|||||:|.:.|::|:.. :.||.|::.|...
 Frog   449 -ELHGYIVHRLF--LAVSKDI-GQQPLVQVAAWCIGEYGELLISGSSEEPV-KVTEDDVLDVLEG 508

  Fly   562 FLTSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRGVEFTQLFGHYKHL 626
            .|.|......::.|.|.::.|||||..:||:.|:.:::.:.|..:|:||||.||:..||..|.|:
 Frog   509 ILQSHISLPNTRAYTLTAIMKLSTRFTRCVDRIRRVVSIYSSCHDVELQQRAVEYNALFKKYDHM 573

  Fly   627 RPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIENGVEGGGGGGHSLIESNMNTLGDNTNIL 691
            |..:|||||..:.|  :::..|:                                          
 Frog   574 RSAILEKMPLSEKS--ATEENET------------------------------------------ 594

  Fly   692 LDLLGSTDLSAGGAGDLVAATDLSNAVHKKNSRNAN-DVVAPVSNNQDLLDLLDL--DLSAPSST 753
                              |..:||.|..:....|:. :...|.|...|||.||::  |::..:|:
 Frog   595 ------------------AIPELSEATERSPLDNSQINFAQPESQVTDLLGLLEVSTDMTMNTSS 641

  Fly   754 TTGAPAGGGGGGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLASMLGGL 818
            |.|.|                                             :|.|....:|:|..|
 Frog   642 TAGPP---------------------------------------------LPQNVTSGSSLLDLL 661

  Fly   819 GAPPAASPSLAASAPVGNLIDGHAGSLLADLNPTAASNNVVVPPQGPRLTALDKDGLLVQLVSVR 883
            ..|.                                  |..:||    |....||||.|:...:|
 Frog   662 DEPV----------------------------------NHEMPP----LVVYSKDGLQVEFSFMR 688

  Fly   884 ---GSDCMRIYMTTTNNSDNTLDQYLLQAAVQRSFQLQMLTPSGSVLP--PGGVITQEMRVVATS 943
               ....:.|..:.||:|..|:..:.|||||.:|.|:|:..||||::|  .||.:||.:||:...
 Frog   689 PPSNPALLVITSSATNSSSITITDFQLQAAVPKSIQIQLQGPSGSLVPASDGGSVTQCIRVLNPQ 753

  Fly   944 NATLRMRLRIQYVLDGQQQVEQTEVSGFP 972
            ...|:||||..::.:|....|..|:|.||
 Frog   754 KVPLKMRLRFSFLQNGNTVQEMCEISNFP 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1gammaNP_788891.2 Adaptin_N 68..624 CDD:279882 295/555 (53%)
Alpha_adaptinC2 869..972 CDD:197886 39/107 (36%)
ap1g2XP_012817266.2 Adaptin_N 23..571 CDD:396262 298/559 (53%)
Alpha_adaptinC2 674..782 CDD:197886 39/107 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 703 1.000 Domainoid score I124
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 767 1.000 Inparanoid score I539
OMA 1 1.010 - - QHG53727
OrthoDB 1 1.010 - - D250202at2759
OrthoFinder 1 1.000 - - FOG0002071
OrthoInspector 1 1.000 - - otm47838
Panther 1 1.100 - - LDO PTHR22780
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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