DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1gamma and ap2a1

DIOPT Version :10

Sequence 1:NP_788891.2 Gene:AP-1gamma / 31842 FlyBaseID:FBgn0030089 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_001090846.1 Gene:ap2a1 / 100038257 XenbaseID:XB-GENE-923183 Length:956 Species:Xenopus tropicalis


Alignment Length:989 Identity:242/989 - (24%)
Similarity:411/989 - (41%) Gaps:251/989 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MPTPTR---LRDL---IRQIRAARTAAEERAVVNKECAYIRSTFREE---DSVWRCRNIAKLLYI 97
            ||..::   :|.|   |..||..::...|...:|||.|.|||.|:.:   |...:.:.:.|||:|
 Frog     1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFI 65

  Fly    98 HMLGYPAHFGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGL 162
            .:||:...||.:|.:.|.:|.::|:|:||||...:|::...::..||.|.:||||.|.....:.|
 Frog    66 FLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLIINAIKNDLASRNPTFMCL 130

  Fly   163 ALCTLGAIASPEMARDLASEVERLMKSPNTY--IRKKATLCAFRVIRRVPELMEIFLPATR--SL 223
            ||..:..:.|.|||...|||:.|::.:.:|.  :::.|.||..|:.:..|:|:.:....:|  .|
 Frog   131 ALHCIANVGSREMAEAFASEIPRILVAGDTMDSVKQSAALCLLRLYKTSPDLVPMGEWTSRVVHL 195

  Fly   224 LSEKNHGILITGVTLITEMCENSSDTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVS--G 286
            |::::.|::...|:|||.:|..:.|..         :..|...|..|..::....:...|.:  .
 Frog   196 LNDQHMGVVTAAVSLITCLCRKNPDDF---------KTCVSLAVSRLSRIVSSASTDLQDYTYYF 251

  Fly   287 VSDPFLQVKILRLLRILGHNDP-DAS------EAMNDILAQVATNTETSK----NVGNTILYETV 340
            |..|:|.||:||||:.  :..| ||:      |.:..||.:.....::.|    |..|.||:|.:
 Frog   252 VPAPWLSVKLLRLLQC--YPPPEDAAVKGRLVECLETILNKAQEPPKSKKVQHSNAKNAILFEAI 314

  Fly   341 LSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHADTS--AVQRHRTTILECLK- 402
            ..|:...||..|.|.|.|.||:||.:.:.|:||:||.::.....::.|  ||:.|..|::..|| 
 Frog   315 SLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKT 379

  Fly   403 DPDVSIRRRAMELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILAAERYSPTTRWHLD 467
            :.|||:|:||.:|.:|:.:..|.:.:..|:|.:||.||...:.:....:.:.||:|:....|::|
 Frog   380 ERDVSVRQRAADLLYAMCDRTNAKQIVSEMLSYLETADYSIREEIVLKVAILAEKYAVDYSWYVD 444

  Fly   468 TQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQTYITNRFWESLQVANHCEDKQPLLQVAVWAIG 532
            |.|:::..||:||.::|....||:|.:.. ..|.|.....:|:|| |..|.:.  :::|..:.:|
 Frog   445 TILNLIRIAGDYVSEEVWYRVIQIVINRD-DVQGYAAKTVFEALQ-APACHEN--MVKVGGYILG 505

  Fly   533 EYGDLF----------MYGANEDEFER---PTESDLIAVYYKFLTSAQVSTTSKQYALVSLAKLS 584
            |:|:|.          .:.....:|..   .|.:.|::.|.||:.....:.|:.|..|.|.::: 
 Frog   506 EFGNLIAGDPRSSPLVQFNLLHSKFHLCSVSTRALLLSTYIKFINLFPETKTTIQDVLRSDSQI- 569

  Fly   585 TRLQQCVEEIQALITSFGSHLNVDLQQRGVEFTQLFG-HYKHLRPPLLEKMPAMQISRISSQNGE 648
                              .:.:|:||||.||:.:|.. ....:...:||:||             
 Frog   570 ------------------RNADVELQQRAVEYLKLSSIASTDVLATVLEEMP------------- 603

  Fly   649 SGGGSFDDNSPDVIENGVEGGGGGGHSLIESNMNTLGDNTNILLDLLGSTDLSAGGAGDLVAATD 713
                .|.:....::....:..|.|                                     |.:|
 Frog   604 ----PFPERESSILAKLKKKKGPG-------------------------------------AVSD 627

  Fly   714 LSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSSTTTGAPAGGGGGGGIVALVGDNNQSS 778
            |......:|| ..|..|.|                .||:.:|.:|:.                  
 Frog   628 LEEGKKDQNS-EINGGVEP----------------TPSTASTPSPSA------------------ 657

  Fly   779 AANMNNMLGGLDLGGFGSGLDSSASIPTNGNDLASMLGGLGAPPAASPSLAASAPVGNLIDGHAG 843
                       ||.|..|...:|::.|:.|:.|..:...   .|.:|..:|..|....|..|.|.
 Frog   658 -----------DLLGLRSTAVTSSAAPSAGSLLVDVFSD---SPTSSVPVAPGAEENFLSSGSAA 708

  Fly   844 SLLADLNPTAASNNVVVPPQGPRLTALDKDGLLVQLVSVRGSDCMRIYMTTTNNSDNTLDQYLLQ 908
            |                  :.|.|...:.|.||.:.|      |        .|:....:..|||
 Frog   709 S------------------EDPALPIAEADELLNKFV------C--------KNNGVLFENQLLQ 741

  Fly   909 AAVQRSF-----------------QLQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQY- 955
            ..|:..|                 |.|..||  :|..||               .|:.::.||. 
 Frog   742 IGVKSEFRQNLGRMYLFYGNKTSVQFQSFTP--TVNYPG---------------ELQSQVNIQTK 789

  Fly   956 ----VLDGQQQVEQ 965
                |::|..||:|
 Frog   790 PVDPVVEGGAQVQQ 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1gammaNP_788891.2 Adaptin_N 68..624 CDD:396262 171/592 (29%)
Alpha_adaptinC2 869..972 CDD:197886 26/119 (22%)
ap2a1NP_001090846.1 Adaptin_N 29..591 CDD:396262 172/595 (29%)
HEAT repeat 332..355 CDD:293787 10/22 (45%)
HEAT repeat 369..398 CDD:293787 12/28 (43%)
HEAT repeat 408..434 CDD:293787 7/25 (28%)
Alpha_adaptinC2 734..837 CDD:197886 20/87 (23%)
Alpha_adaptin_C 843..951 CDD:426707
Blue background indicates that the domain is not in the aligned region.

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