DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl3b

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001038373.1 Gene:arl3b / 797451 ZFINID:ZDB-GENE-030131-7518 Length:182 Species:Danio rerio


Alignment Length:186 Identity:68/186 - (36%)
Similarity:100/186 - (53%) Gaps:32/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TQKDDYCVVILGLDNAGKTTYL-EAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDL 76
            |...:..:::|||||.||||.| :.|....|.         ||.|.|.||.::..||.:||.||:
Zfish    13 TPDQEVRILLLGLDNGGKTTLLKQLASEDITH---------ITPTQGFNIKSVQSQGFKLNVWDI 68

  Fly    77 GGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDV 141
            |||::::..|..|::.:..:||||||.||:|.||:.....:::..|.|||||:|:.||||||...
Zfish    69 GGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQDLLTA 133

  Fly   142 MGVREIKP----------VFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAI 187
            ....||..          |:|       .:.|     |||.||||.:|:.|:.:::
Zfish   134 APASEIAEGLNLHTIRDRVWQ-------IQSC-----SALTGEGVQDGMNWVCKSV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 67/177 (38%)
arl3bNP_001038373.1 Arl3 3..175 CDD:206721 68/182 (37%)

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