DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arf4

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_063131826.1 Gene:Arf4 / 79120 RGDID:621275 Length:186 Species:Rattus norvegicus


Alignment Length:131 Identity:53/131 - (40%)
Similarity:82/131 - (62%) Gaps:14/131 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIGTIDVQGVRLNFWDLGGQQE 81
            ::::|||.|||||.|          || |...:|.|   |:|.|:.|::.:.:....||:|||.:
  Rat    20 ILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDK 73

  Fly    82 LQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVRE 146
            ::.||..|:|.:.|:|:|:|||||||::|..|:..||:..:.|....||:.|||||||:.|.:.|
  Rat    74 IRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISE 138

  Fly   147 I 147
            :
  Rat   139 M 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 53/131 (40%)
Arf4XP_063131826.1 None

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