DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl5b

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_083742.3 Gene:Arl5b / 75869 MGIID:1923119 Length:179 Species:Mus musculus


Alignment Length:180 Identity:63/180 - (35%)
Similarity:92/180 - (51%) Gaps:28/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT--TVGLNIGTIDVQGVRLNFWDLGGQ 79
            ::.|:|:|||||||||.|          |:.|....:.|  |:|.|:..|.|:......||:|||
Mouse    16 EHKVIIVGLDNAGKTTIL----------YQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQ 70

  Fly    80 QELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGV 144
            :.|:|.|:.||..:..:|.|:||.||||:..:|....:|:.:|.|....:||.|||||:...|..
Mouse    71 ESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTA 135

  Fly   145 REIKPVFQQAGALIGRRD-------CLTIPVSALHGEGVDEGIKWLVEAI 187
            .||....    .|...:|       |     .||.|||:.:|::|:...|
Mouse   136 AEISKYL----TLSSIKDHPWHIQSC-----CALTGEGLCQGLEWMTSRI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 62/175 (35%)
Arl5bNP_083742.3 Arl5_Arl8 3..175 CDD:133353 62/177 (35%)

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