DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl5a

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_892039.1 Gene:Arl5a / 75423 MGIID:1922673 Length:179 Species:Mus musculus


Alignment Length:195 Identity:67/195 - (34%)
Similarity:100/195 - (51%) Gaps:28/195 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTID 65
            ::|.:...:.:...|    |:|:|||||||||.|    ..|:.|    .....:.|:|.|:..|.
Mouse     4 LFTRIWRLFNHQEHK----VIIVGLDNAGKTTIL----YQFSMN----EVVHTSPTIGSNVEEIV 56

  Fly    66 VQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLL 130
            |...|...||:|||:.|:..|:.||..:..||.|:||.||||:..::....||:.:|.|....||
Mouse    57 VNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLL 121

  Fly   131 ILANKQDLPDVMGVREIKPVFQQAGALIGRRD-------CLTIPVSALHGEGVDEGIKWLVEAIK 188
            |.|||||:.:.|.|.||....:    |...:|       |     .||.|||:.:|::|::..:|
Mouse   122 IFANKQDVKECMTVAEISQFLK----LTSIKDHQWHIQAC-----CALTGEGLCQGLEWMMSRLK 177

  Fly   189  188
            Mouse   178  177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 64/173 (37%)
Arl5aNP_892039.1 Arl5_Arl8 3..175 CDD:133353 66/191 (35%)

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