DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl6

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001334173.1 Gene:Arl6 / 56297 MGIID:1927136 Length:193 Species:Mus musculus


Alignment Length:179 Identity:56/179 - (31%)
Similarity:91/179 - (50%) Gaps:20/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGG 78
            :|.:..|:.|||||:||||.:...|.:..::      ..|..|:|.:|.......:....:|:.|
Mouse    14 KKKEVHVLCLGLDNSGKTTIINKLKPSNAQS------QDIVPTIGFSIEKFKSSSLSFTVFDMSG 72

  Fly    79 QQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLS--GVPLLILANKQDLPDV 141
            |...::||:.||::...:|:||||:|:.||..:|...|.::.:..:.  .:|:|..|||.||.| 
Mouse    73 QGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRD- 136

  Fly   142 MGVREIKPVFQQAGALIGRRD-----CLTIPVSALHGEGVDEGIKWLVE 185
             .|..:|  ..|...|...:|     |.:   .|:.|||:.||:.||.|
Mouse   137 -SVTSVK--VSQLLCLESIKDKPWHICAS---DAIKGEGLQEGVDWLQE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 52/170 (31%)
Arfrp1 19..186 CDD:206725 55/174 (32%)
Arl6NP_001334173.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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