DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl15b

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_005155677.1 Gene:arl15b / 560030 ZFINID:ZDB-GENE-080813-2 Length:287 Species:Danio rerio


Alignment Length:172 Identity:52/172 - (30%)
Similarity:80/172 - (46%) Gaps:29/172 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQ 79
            :.:|.||.:||..:|||:.|....:..|.|        |..|.|.:|..:..|...||..:|||.
Zfish   113 RPEYDVVCIGLTGSGKTSLLSRLCSEATDN--------IVPTTGFSIKAVPFQNAILNVKELGGA 169

  Fly    80 QELQSLWDKYYQESHGVIYVIDS-NDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMG 143
            ..::..|.:|||.|.||::|:|| :..|.:|.::......:::..|..:|.|||||.||.|....
Zfish   170 DSIKKYWSRYYQGSQGVVFVLDSASSEEDLEVARTELHSALQHPQLCTLPFLILANHQDKPAARS 234

  Fly   144 VREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVE 185
            |:|||..|:.                    |.:..|..|::|
Zfish   235 VQEIKKYFEL--------------------EPLARGKSWILE 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 51/168 (30%)
arl15bXP_005155677.1 P-loop containing Nucleoside Triphosphate Hydrolases 117..274 CDD:476819 51/168 (30%)

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