DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arfrp1

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_005166227.1 Gene:arfrp1 / 503602 ZFINID:ZDB-GENE-050227-14 Length:201 Species:Danio rerio


Alignment Length:200 Identity:130/200 - (65%)
Similarity:159/200 - (79%) Gaps:1/200 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTID 65
            ||||:.|.||||.|||:||::|||||||||||:||..||.|::||||:|.|||||||||||||||
Zfish     1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQTKTRFSKNYKGMNLSKITTTVGLNIGTID 65

  Fly    66 VQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLL 130
            |...||.|||||||:||||||||||.|||||||||||.|.||:.|||..|:|||.:|.|.|||||
Zfish    66 VGKARLMFWDLGGQEELQSLWDKYYAESHGVIYVIDSTDEERLGESKNAFEKMISSEALEGVPLL 130

  Fly   131 ILANKQDLPDVMGVREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAIKRHAVVRP 195
            :||||||:.:.:.|.:||..|......||:||||..|.:||.|:||::||:|:|:.:.|: :.||
Zfish   131 VLANKQDVENCLSVPDIKTAFSDCAPKIGKRDCLVQPCAALSGQGVNDGIEWMVKCVIRN-IHRP 194

  Fly   196 PREND 200
            ||:.|
Zfish   195 PRQKD 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 109/163 (67%)
Arfrp1 19..186 CDD:206725 111/166 (67%)
arfrp1XP_005166227.1 Arfrp1 19..186 CDD:206725 111/166 (67%)
Ras 20..189 CDD:278499 110/168 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578992
Domainoid 1 1.000 249 1.000 Domainoid score I2094
eggNOG 1 0.900 - - E1_KOG0076
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2425
Inparanoid 1 1.050 273 1.000 Inparanoid score I2956
OMA 1 1.010 - - QHG55556
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0005591
OrthoInspector 1 1.000 - - oto40779
orthoMCL 1 0.900 - - OOG6_103510
Panther 1 1.100 - - LDO PTHR45909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2036
SonicParanoid 1 1.000 - - X3998
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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