DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and ARL2

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001658.2 Gene:ARL2 / 402 HGNCID:693 Length:184 Species:Homo sapiens


Alignment Length:179 Identity:68/179 - (37%)
Similarity:108/179 - (60%) Gaps:11/179 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYMTQKD-DYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNF 73
            |.|.||: :..:::||||||||||.|        :.:.|.:...|:.|:|.||.|::.:|.:||.
Human     8 KKMKQKERELRLLMLGLDNAGKTTIL--------KKFNGEDIDTISPTLGFNIKTLEHRGFKLNI 64

  Fly    74 WDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDL 138
            ||:|||:.|:|.|..|::.:.|:|:|:||.||:||::.:.....::..|.|:|..|||.||||||
Human    65 WDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 129

  Fly   139 PDVMGVREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAI 187
            |..:....|:.|. :..::.....|:. ..||:.||.:..||.||::.|
Human   130 PGALSSNAIREVL-ELDSIRSHHWCIQ-GCSAVTGENLLPGIDWLLDDI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 60/163 (37%)
Arfrp1 19..186 CDD:206725 63/166 (38%)
ARL2NP_001658.2 Arl2 3..175 CDD:206720 67/176 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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