DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl2

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_989148.1 Gene:arl2 / 394753 XenbaseID:XB-GENE-494099 Length:184 Species:Xenopus tropicalis


Alignment Length:179 Identity:66/179 - (36%)
Similarity:105/179 - (58%) Gaps:11/179 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYMTQKD-DYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNF 73
            |.|.||: :..:::||||||||||.|        :.:.|.:.:.|:.|:|.||.|::.:|.:||.
 Frog     8 KKMKQKEREVRLLMLGLDNAGKTTIL--------KKFNGEDINTISPTLGFNIKTLEHRGFKLNM 64

  Fly    74 WDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDL 138
            ||:|||:.|:|.|..|::.:.|:|:|:||.||.|:::.......::..|.|:|..||:.||||||
 Frog    65 WDVGGQKSLRSYWRNYFESTDGLIWVVDSADRARLQDCAQELAGLLLEERLAGATLLVFANKQDL 129

  Fly   139 PDVMGVREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAI 187
            |..:....||... :...:.....|:. ..||:.||.:..||.||::.|
 Frog   130 PGALSKDAIKEAL-ELDNIKTHHWCIQ-GCSAVTGENLLTGIDWLLDDI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 58/163 (36%)
Arfrp1 19..186 CDD:206725 61/166 (37%)
arl2NP_989148.1 Arl2 3..175 CDD:206720 65/176 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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