DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and ARL13A

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001155963.1 Gene:ARL13A / 392509 HGNCID:31709 Length:256 Species:Homo sapiens


Alignment Length:180 Identity:54/180 - (30%)
Similarity:98/180 - (54%) Gaps:25/180 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQS 84
            :.|:||:|:|||..:||        ::.|.|||....:...:.|:.:....|:.:||.|..:.:.
Human    24 IPIIGLNNSGKTVLVEA--------FQKLLPSKTDHCMKSELTTLLLDEYELSIYDLNGDLKGRE 80

  Fly    85 LWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQD-----LP-DVMG 143
            .|..||.::||:::|:||:|..||:|.|.|...::.::.::|.|:||||||||     :| |::.
Human    81 AWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRVAGKPILILANKQDKKKALMPCDIID 145

  Fly   144 VREIKPVFQQAGALIGRRDCLTIPVSALHG------EGVDEGIKWLVEAI 187
            ...:|.:.::     .:..|...|.||:..      :.:.||::||:..|
Human   146 YLLLKKLVKE-----NKCPCRVEPCSAIRNLERRNHQPIVEGLRWLLAVI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 53/177 (30%)
ARL13ANP_001155963.1 Arl2l1_Arl13_like 23..189 CDD:133361 53/177 (30%)

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