DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl6

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster


Alignment Length:183 Identity:55/183 - (30%)
Similarity:95/183 - (51%) Gaps:20/183 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGT--IDVQGVRLNFWDL 76
            :||...:::|||:|:||::.:...|.:..:.      |.:..|||..:..  |.:.||.:...|:
  Fly    14 KKDKMTILVLGLNNSGKSSIINHFKKSSEQT------SIVVPTVGFMVEQFYIGMSGVSIKAIDM 72

  Fly    77 GGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSG--VPLLILANKQDLP 139
            .|....::||:..::..||:||||||:||.|....|...|.::::..|..  ||:|...||.|:.
  Fly    73 SGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDME 137

  Fly   140 DVMGVREIKPVFQQAGAL----IGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188
            |.:...:|      |.||    |..:.......||:.|||:.||::||::.::
  Fly   138 DSLSSVKI------AAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 53/174 (30%)
Arl6NP_611421.1 Arl6 19..182 CDD:206722 53/174 (30%)

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