DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arfrp1 and Arf6

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster


Alignment Length:167 Identity:63/167 - (37%)
Similarity:96/167 - (57%) Gaps:16/167 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT--TVGLNIGTIDVQGVRLNFWDLGGQQEL 82
            :::||||.|||||.|          ||......:||  |||.|:.|:..:.|:.|.||:|||.::
  Fly    16 ILMLGLDAAGKTTIL----------YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70

  Fly    83 QSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREI 147
            :.||..||..:.|:|:|:|..||:|::|::....::|.:..:....:||.||||||||.|...||
  Fly    71 RPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEI 135

  Fly   148 KPVFQQAG-ALIGRRDCLTIPVSALHGEGVDEGIKWL 183
            :   ::.| ..|..|:....|..|..|:|:.||:.||
  Fly   136 Q---EKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 63/167 (38%)
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 63/167 (38%)

Return to query results.
Submit another query.