DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl13b

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_775379.2 Gene:arl13b / 286784 ZFINID:ZDB-GENE-021217-3 Length:407 Species:Danio rerio


Alignment Length:180 Identity:60/180 - (33%)
Similarity:103/180 - (57%) Gaps:21/180 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDV-QG-VRLNFWDLGGQQEL 82
            :|::||||||||..:        |..:|.:|..:..|||.:  .:|: || ..:..:||||.:.:
Zfish    24 LVMVGLDNAGKTATV--------RGIQGESPLDVAPTVGFS--KVDLKQGKFEVTIFDLGGGKRI 78

  Fly    83 QSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREI 147
            :.:|..||.||:||::|:||:|.:|::|::....:::::..::|.|:|:||||||....|...:|
Zfish    79 RGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADI 143

  Fly   148 KPVFQQAGALIGRRDCL--TIPVSAL--HGEGVDEGIK----WLVEAIKR 189
            .... ....|:....||  ..|.||:  :|:.||:.||    ||:..|.:
Zfish   144 IETL-SLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNIAK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 59/175 (34%)
arl13bNP_775379.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..407
Blue background indicates that the domain is not in the aligned region.

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