DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arfrp1 and Arf79F

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_320516.2 Gene:Arf79F / 1280655 VectorBaseID:AGAMI1_004358 Length:182 Species:Anopheles gambiae


Alignment Length:192 Identity:66/192 - (34%)
Similarity:104/192 - (54%) Gaps:18/192 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIG 62
            |..:....:|.:..|.:..::::|||.|||||.|          || |...:|.|   |:|.|:.
Mosquito     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVE 54

  Fly    63 TIDVQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGV 127
            |::.:.:....||:|||.:::.||..|:|.:.|:|:|:|||||||:.|::....:|:..:.|...
Mosquito    55 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDA 119

  Fly   128 PLLILANKQDLPDVMGVREIKPVFQQAGA-LIGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188
            .|||.|||||||:.|...||.   .:.|. .:..|:.......|..|:|:.||:.||...:|
Mosquito   120 VLLIFANKQDLPNAMNAAEIT---DKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 62/170 (36%)
Arf79FXP_320516.2 ARF 5..179 CDD:128474 65/188 (35%)

Return to query results.
Submit another query.