DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arfrp1 and LOC1274642

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_313793.6 Gene:LOC1274642 / 1274642 VectorBaseID:AGAMI1_001491 Length:179 Species:Anopheles gambiae


Alignment Length:181 Identity:61/181 - (33%)
Similarity:100/181 - (55%) Gaps:32/181 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQS 84
            :::||||||||||.|:...:.        ..:::|.|.|.||.::...|.:||.||:|||.:::.
Mosquito    20 ILLLGLDNAGKTTLLKQLASE--------EVTQVTPTAGFNIKSVVSDGFKLNVWDIGGQSKIRP 76

  Fly    85 LWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREIKP 149
            .|..|::.:..:||||||:|::|:||:.....:::.::.|..||||:.|||||:...:...||  
Mosquito    77 YWKNYFENTDVLIYVIDSSDKKRLEETGDELTELLLDDKLKSVPLLVFANKQDVVGALKASEI-- 139

  Fly   150 VFQQAGALIGRRDCLTI-----------PVSALHGEGVDEGIKWLVEAIKR 189
                       .:||.:           ..|||.|.||.||:.|:.::||:
Mosquito   140 -----------AECLKLVKLMDRTWQIQGCSALQGTGVKEGMDWVCKSIKK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 59/176 (34%)
LOC1274642XP_313793.6 None

Return to query results.
Submit another query.