DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Sar1

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_312971.1 Gene:Sar1 / 1274012 VectorBaseID:AGAMI1_010375 Length:193 Species:Anopheles gambiae


Alignment Length:182 Identity:58/182 - (31%)
Similarity:87/182 - (47%) Gaps:26/182 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAK-TTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQ 83
            ::.||||||||||.|...| ....::...|:|    |:..|:||     .:|...:||||..:.:
Mosquito    23 LLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHP----TSEELSIG-----NMRFTTFDLGGHTQAR 78

  Fly    84 SLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREIK 148
            .:|..|:.....::::||:.||.|..|||...|.::.:|.||..|:|||.||.|.|......|::
Mosquito    79 RVWKDYFPAVDAIVFLIDAWDRTRFTESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEEELR 143

  Fly   149 PVFQQAGALIGRRDCLTIPVSALHG-------------EGVDEGIKWLVEAI 187
            ..|.......|:.   .:|.|.|.|             :|..||.:||.:.|
Mosquito   144 NYFALFQLTTGKG---KVPRSELPGRPLELFMCSVLKRQGYGEGFRWLAQYI 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 57/179 (32%)
Sar1XP_312971.1 Sar1 2..192 CDD:206645 57/180 (32%)

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