DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arf2

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_031503.1 Gene:Arf2 / 11841 MGIID:99595 Length:181 Species:Mus musculus


Alignment Length:192 Identity:64/192 - (33%)
Similarity:104/192 - (54%) Gaps:18/192 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIG 62
            |..:....:|.:..|.:..::::|||.|||||.|          || |...:|.|   |:|.|:.
Mouse     1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVE 54

  Fly    63 TIDVQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGV 127
            |::.:.:....||:|||.:::.||..|:|.:.|:|:|:|||||||:.|::....:|:..:.|...
Mouse    55 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDA 119

  Fly   128 PLLILANKQDLPDVMGVREIKPVFQQAGA-LIGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188
            .||:..||||||:.|...||.   .:.|. .:.:|:.......|..|:|:.||:.||...:|
Mouse   120 VLLVFVNKQDLPNAMNAAEIT---DKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 60/170 (35%)
Arf2NP_031503.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 64/192 (33%)

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