DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl1

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_080135.2 Gene:Arl1 / 104303 MGIID:99436 Length:181 Species:Mus musculus


Alignment Length:176 Identity:64/176 - (36%)
Similarity:93/176 - (52%) Gaps:24/176 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIGTIDVQGVRLNFWDLGGQQE 81
            ::|||||.|||||.|          |: |...::.|   |:|.|:.|:..:.::...||||||..
Mouse    20 ILILGLDGAGKTTIL----------YR-LQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTS 73

  Fly    82 LQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVRE 146
            ::..|..||..:..||||:||.||:|:..||:....|::.|.|....|::.|||||:...|...|
Mouse    74 IRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSE 138

  Fly   147 IKPVFQQAGAL----IGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188
            :      |.||    :..|.......||..|.|:||.::||||.:|
Mouse   139 M------ANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 59/167 (35%)
Arfrp1 19..186 CDD:206725 62/172 (36%)
Arl1NP_080135.2 Arl1 19..176 CDD:206718 62/172 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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