DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and Arl14

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001386692.1 Gene:Arl14 / 103690167 RGDID:9465124 Length:192 Species:Rattus norvegicus


Alignment Length:180 Identity:65/180 - (36%)
Similarity:109/180 - (60%) Gaps:17/180 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTY---LEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQ-GVRLNFWDLGGQQ 80
            :::||||:|||:|.   |:.|:|..|           ..|:|.|:..:.:| |:.|..||:|||:
  Rat    16 ILLLGLDSAGKSTLLYRLKFAETLAT-----------IPTIGFNVEMVQLQSGLALTVWDIGGQE 69

  Fly    81 ELQSLWDKYYQESHGVIYVID-SNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGV 144
            :::::||.|.:.:||::||:| |..::|:|:|:..|..::|||.:...|::|||||||||..:..
  Rat    70 KMRTVWDCYCENAHGLVYVVDCSEGQKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSA 134

  Fly   145 REIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAIKRHAVVR 194
            .:|..:| :...|...|:....|..|:.|||:|:|.:.|.|.:|.|...|
  Rat   135 EDITRMF-KVKKLCSDRNWYVQPCCAVTGEGLDDGFRKLTEFVKSHLKTR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 61/170 (36%)
Arl14NP_001386692.1 ARLTS1 15..175 CDD:133356 61/170 (36%)

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