DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arf11l.2

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_004918747.2 Gene:arf11l.2 / 101734701 XenbaseID:XB-GENE-22065200 Length:188 Species:Xenopus tropicalis


Alignment Length:198 Identity:60/198 - (30%)
Similarity:105/198 - (53%) Gaps:32/198 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT--TVGLNIGT 63
            :|.::.||:....:     :::||||.|||||.|...|...|          :||  |:|.|:.|
 Frog     8 LYQILMGFHGTKAR-----IIMLGLDAAGKTTVLYKLKFNET----------VTTIPTIGFNVET 57

  Fly    64 ID-VQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGV 127
            :: :..|....||:|||..:::||..|:..:.|:::|:||.|.||.:|::...:.::..:.:.||
 Frog    58 VEPMHNVSFTVWDVGGQGRIRALWKYYFTNADGLVFVVDSADCERFQEARLELEAILDTDEMRGV 122

  Fly   128 PLLILANKQDLPDVMGVREIKPVFQQAG--ALIGR----RDCLTIPVSALHGEGVDEGIKWLVEA 186
            |.:::|||||||   |.|....|.::.|  .:.|.    :.|     .|..|:|:.||::.....
 Frog   123 PFVVMANKQDLP---GSRRPMEVAEELGLPKIQGHPWHVQGC-----CATTGDGLVEGLEVFTNL 179

  Fly   187 IKR 189
            :|:
 Frog   180 VKQ 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 56/172 (33%)
Arfrp1 19..186 CDD:206725 56/175 (32%)
arf11l.2XP_004918747.2 Arf_Arl 21..174 CDD:206644 56/175 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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