DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl3

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_002938771.2 Gene:arl3 / 100492073 XenbaseID:XB-GENE-956688 Length:182 Species:Xenopus tropicalis


Alignment Length:178 Identity:68/178 - (38%)
Similarity:99/178 - (55%) Gaps:30/178 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQS 84
            :::||||||||||.|:...:.        :.|.||.|.|.||.::..||.:||.||:|||::::.
 Frog    20 ILLLGLDNAGKTTLLKQLASE--------DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRP 76

  Fly    85 LWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREIKP 149
            .|..|::.:..:||||||.||:|.||:.....:::..|.|||||:||.||||||.......||..
 Frog    77 YWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAE 141

  Fly   150 ----------VFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAI 187
                      |:|       .:.|     |||.||||.:|:.|:.:.:
 Frog   142 GLNLHTIRDRVWQ-------IQSC-----SALTGEGVQDGMNWVCKNV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 68/175 (39%)
arl3XP_002938771.2 Arl3 3..176 CDD:206721 68/175 (39%)

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