DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl11

DIOPT Version :9

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_002935781.1 Gene:arl11 / 100490310 XenbaseID:XB-GENE-1012125 Length:180 Species:Xenopus tropicalis


Alignment Length:176 Identity:58/176 - (32%)
Similarity:96/176 - (54%) Gaps:21/176 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAK-----TTFTRNYKGLNPSKITTTVGLNIGTIDV-QGVRLNFWDLGG 78
            ||::|||.:||:|.|...|     .||             .|||.|:..|:: :.|.:..||:||
 Frog    16 VVMMGLDYSGKSTILYKLKINQLVETF-------------PTVGFNVEHIEMSKNVSVTVWDVGG 67

  Fly    79 QQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMG 143
            |.:|:..|.:|.:::..:|:|:||:|.:|:.::.|....::.||.::|||.||||||||:.|.:.
 Frog    68 QDKLRPNWKEYLEDTDVLIFVVDSSDPDRLPDATAELLSILNNENMAGVPFLILANKQDITDALP 132

  Fly   144 VREIKPVFQQAGALIGRRDCLTIPVSALHGEGVDEGIKWLVEAIKR 189
            .:|:|.:.:...  ...|.......||..|||:.|.:..:...:||
 Frog   133 AKELKHILKLEN--YDDRPWEIQSCSAYTGEGLAEAMNAVASLLKR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 56/166 (34%)
Arfrp1 19..186 CDD:206725 56/171 (33%)
arl11XP_002935781.1 P-loop_NTPase 15..173 CDD:422963 56/171 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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