DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfrp1 and arl13b

DIOPT Version :10

Sequence 1:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001184084.1 Gene:arl13b / 100124913 XenbaseID:XB-GENE-1014460 Length:434 Species:Xenopus tropicalis


Alignment Length:201 Identity:68/201 - (33%)
Similarity:103/201 - (51%) Gaps:29/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQS 84
            :|::||||||||..:        :..:|.:|..:..|||.:...|......:..:||||.:.::.
 Frog    24 LVMVGLDNAGKTATV--------KGIQGESPEDVAPTVGFSKADIKQGRFDITMFDLGGGKRIRG 80

  Fly    85 LWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREIKP 149
            :|..||.||:||::||||:|.|||||:|....:::::..:||.|:|:||||||....:...:|..
 Frog    81 IWKNYYAESYGVVFVIDSSDVERMEETKETIAEVLRHPRISGKPVLVLANKQDREGALSEADIIE 145

  Fly   150 VFQQAGALIGRRDCL--TIPVSAL--HGEGVDEGIK----WLVEAI------------KRHAVVR 194
             |.....|:....||  ..|.||.  ||:.:|:.||    ||:..|            |..|..|
 Frog   146 -FLSLEKLVNEYKCLCQIEPCSAAIGHGKKIDKSIKNGLNWLLRVIAKDFEALHERVQKETAEQR 209

  Fly   195 PPREND 200
            ...|.|
 Frog   210 AQEEQD 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 62/173 (36%)
arl13bNP_001184084.1 Arl2l1_Arl13_like 23..189 CDD:133361 62/173 (36%)

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