DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx42 and SKIP

DIOPT Version :10

Sequence 1:NP_511093.2 Gene:Bx42 / 31840 FlyBaseID:FBgn0004856 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_565151.1 Gene:SKIP / 844055 AraportID:AT1G77180 Length:613 Species:Arabidopsis thaliana


Alignment Length:574 Identity:258/574 - (44%)
Similarity:354/574 - (61%) Gaps:63/574 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPTP---TNAIWDREDE---RRLVARGAPKIGALVSAKIAAPPYGQRKDWVPHTDADFGDGGAFP 65
            ||.|   |...:|..::   :..|........:.:..|: .|.|..|:...|....|||||||||
plant     7 LPAPKSTTTTYYDHSNDAWFKNRVTESETVKSSSIKFKV-VPAYLNRQGLRPKNPEDFGDGGAFP 70

  Fly    66 EIHVAQYPLGLGAPGNVGKKSDA--LAVRLDDKGKVKYDAIARQGHGKDKIVYSSISQLLP---- 124
            |||:.||||.:|.  |...|..|  |.|.:|.:|.|.:|||.||.....|||||....::|    
plant    71 EIHLPQYPLLMGK--NKSNKPGAKTLPVTVDAQGNVVFDAIVRQNENSRKIVYSQHKDIIPKFLK 133

  Fly   125 ----AEVLAEDADELQRPDEETVMETTEETRLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPS 185
                ...:.::.:|||:    .:.||.|||:.|:||:.|.::::|.|...|:::|.:|||:|.||
plant   134 NEGDLGTVVDEEEELQK----EIQETAEETKAAIEKIVNVRLSAAQPSNIARQSGDSQYIKYKPS 194

  Fly   186 QQGDTFNSGAKQRVIRMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKI 250
            ||...||||||:|:|||||..:||::||||: :|::||...|||.||:|||.|.||||:|::|||
plant   195 QQSSAFNSGAKERIIRMVEMPVDPLDPPKFK-HKRVPRASGSPPVPVMHSPPRPVTVKDQQDWKI 258

  Fly   251 PPCISNWKNAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRKAREAVEARSQLEKKL 315
            |||||||||.|||||||||||||||||||.|.||:.|||::||||:|::||||||..||:::|::
plant   259 PPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVSMRSKVQKEM 323

  Fly   316 AQKEKEKKEDMLRMMAQRAREERAGL------------------------------RNPEAAEPS 350
            ..|:||:||..||.:||:||.||.|.                              |..|..||.
plant   324 VMKDKERKEQELRALAQKARSERTGAAMSMPVSSDRGRSESVDPRGDYDNYDQDRGREREREEPQ 388

  Fly   351 GSGATGSEVRERNDLRAERQRERQRDRNL--QRAAPEKRSKLQKERERDISEQIALGLPAKSA-G 412
            .:.....:..:|..:|.||:|||:|:|.|  :.||..|:||:.::|:|||||::|||:.:... |
plant   389 ETREEREKRIQREKIREERRRERERERRLDAKDAAMGKKSKITRDRDRDISEKVALGMASTGGKG 453

  Fly   413 NGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSNTLGAHIYRPSKQADSDNYGG---DLDA 474
            .||.::||||||..||||||:..|:.||:|||....:....:.:|:|.|..|.:.||.   .||.
plant   454 GGEVMYDQRLFNQDKGMDSGFAADDQYNLYDKGLFTAQPTLSTLYKPKKDNDEEMYGNADEQLDK 518

  Fly   475 IVNTKRFVPDKQFSGASKEAAAGQRSGPVEFEKEE--DPFGLDQFLNMAKKAPK 526
            |.||:||.|||.|:||| |....:|..||||||||  |||||:::::..||..|
plant   519 IKNTERFKPDKAFTGAS-ERVGSKRDRPVEFEKEEEQDPFGLEKWVSDLKKGKK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bx42NP_511093.2 SKIP_SNW 181..337 CDD:460666 102/155 (66%)
SKIPNP_565151.1 SKIP_SNW 190..345 CDD:460666 102/155 (66%)

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