DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx42 and snw1

DIOPT Version :9

Sequence 1:NP_001259370.1 Gene:Bx42 / 31840 FlyBaseID:FBgn0004856 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001017145.1 Gene:snw1 / 549899 XenbaseID:XB-GENE-1006928 Length:535 Species:Xenopus tropicalis


Alignment Length:552 Identity:345/552 - (62%)
Similarity:419/552 - (75%) Gaps:22/552 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLSSLLPTPTNAIWDR-EDERRLVARGAPKIGALVSAKIAAPPYGQRKDWVPHTDADFGDGGAF 64
            |:|:|.||.||....|: |.|.:|.|:.:.:. |||:::..:||||.||.|||.:..||||||||
 Frog     1 MALASFLPAPTQLSQDQLEAEEKLRAQKSRQT-ALVASRRESPPYGHRKGWVPRSLEDFGDGGAF 64

  Fly    65 PEIHVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVKYDAIARQGHGKDKIVYSSISQLLPAEVLA 129
            ||||||||||.:   |...|.|:||||::|.:||:|||||||||..|||:::|..:.|:|.||:.
 Frog    65 PEIHVAQYPLDM---GRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIFSKYTDLVPKEVMD 126

  Fly   130 EDADELQRPDEETVMETTEETRLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPSQQGDTFNSG 194
            ||..|||||||||:.|.||:||.||||..:|||.:|:|||.|.|..|||||||||||||..||||
 Frog   127 EDDPELQRPDEETIKELTEKTRQALEKSVSQKIAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSG 191

  Fly   195 AKQRVIRMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKIPPCISNWKN 259
            ||||||||||.|.||||||:|:||||||||||||||||:||||||:|||||:|||||||||||||
 Frog   192 AKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKN 256

  Fly   260 AKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRKAREAVEARSQLEKKLAQKEKEKKE 324
            ||||||||||||||||||||.|||||.|||:||||||||||||||||.|:|:|:|:|||||||||
 Frog   257 AKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKKE 321

  Fly   325 DMLRMMAQRAREERAGLRNPEAAEPSGSGATGSEVRERNDLRAERQRERQRDRNLQRAAPEKRSK 389
            :.||.:||.|||.|||::       |.:.....|.|||.::|.||::|||.:|||.||||:||||
 Frog   322 EKLRELAQIARERRAGIK-------SHTDKEDGEAREREEIRHERRKERQHERNLSRAAPDKRSK 379

  Fly   390 LQKERERDISEQIALGLPAKSAGNGETLFDQRLFNTTKGMDSGY--GDDEAYNVYDKPWRDSNTL 452
            ||:..|||||||||||:|.:.. :.|..:||||||.::|||||:  |:||.||||||||..:..|
 Frog   380 LQRNEERDISEQIALGIPNQRT-SSEVQYDQRLFNQSRGMDSGFAGGEDEVYNVYDKPWLGNKKL 443

  Fly   453 GAHIYRPSKQADSDNYGGDLDAIVNTKRFVPDKQFSGASKEAAAGQRSGPVEFEKEEDPFGLDQF 517
            ..:||||||..|:|.||.|||.:|.|.||||||.||||.:..   :..|||:|  ||||||||:|
 Frog   444 AQNIYRPSKNTDNDVYGDDLDTLVKTNRFVPDKDFSGADRRQ---RHEGPVQF--EEDPFGLDKF 503

  Fly   518 LNMAKK--APKRAEEKNNERSSHSDRKRSKRD 547
            |..||:  ..||..:....:....|.|:.:::
 Frog   504 LEEAKQHGGSKRPSDSGRAKDHDHDMKKRRKE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bx42NP_001259370.1 SKIP_SNW 181..337 CDD:280827 133/155 (86%)
snw1NP_001017145.1 SKIP_SNW 178..334 CDD:280827 133/155 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 287 1.000 Domainoid score I1573
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56557
Inparanoid 1 1.050 660 1.000 Inparanoid score I763
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1455730at2759
OrthoFinder 1 1.000 - - FOG0005122
OrthoInspector 1 1.000 - - oto103725
Panther 1 1.100 - - LDO PTHR12096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3642
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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