DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx42 and prp45

DIOPT Version :10

Sequence 1:NP_511093.2 Gene:Bx42 / 31840 FlyBaseID:FBgn0004856 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_588213.1 Gene:prp45 / 2538988 PomBaseID:SPCC188.11 Length:557 Species:Schizosaccharomyces pombe


Alignment Length:562 Identity:254/562 - (45%)
Similarity:347/562 - (61%) Gaps:64/562 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSSLLPTPTNAIWDREDERRLVARGAPKIGALVSAKIAAPPYGQRKDWVPHTDADFGDGGAFPEI 67
            |||:||.|.   :|.|:|..:....:......:..|...|||||||.|.|.:..|||||||||||
pombe     8 LSSILPNPD---FDDEEEDYVERETSHADERQIGVKFHIPPYGQRKGWFPSSPEDFGDGGAFPEI 69

  Fly    68 HVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVKYDAIARQGHGKDKIVYSSISQLLPAEV-LAED 131
            |||||||.:|...:.....:.||:::...|.|.|:|||||||...::|.:|...|:|... |...
pombe    70 HVAQYPLDMGRKRSAKSAGNTLALQVTSSGAVDYNAIARQGHEHGELVQASFRDLIPLRARLGVG 134

  Fly   132 ADELQRPDEETVMETTEETRLALEKLTNQKITSALPVRHA--QKAGPAQYIRYTPS-QQGDTFNS 193
            ...|::|.:|...|...:|:|||:|:.:::|..:.|....  |:..|. ||||||| |.|...  
pombe   135 EISLEKPSDEQKQEVANKTKLALQKILSKQIAQSQPKSAVVQQRDDPV-YIRYTPSNQMGQAL-- 196

  Fly   194 GAKQRVIRMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKIPPCISNWK 258
             :|||:|:||.|:.||||||||| :||:||||||||.||||||.|||:.:||::|:|||.|||||
pombe   197 -SKQRIIKMVTAEQDPMEPPKFR-HKKVPRGPPSPPPPVLHSPPRKVSAQEQQDWQIPPSISNWK 259

  Fly   259 NAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRKAREAVEARSQLEKKLAQKEKEKK 323
            |.||||||||||||||||||..|.||:.|||.:||||..:|:|||.|..|:.:.:|:|:|||::|
pombe   260 NPKGYTIPLDKRLAADGRGLNDVEINDGFAKFSEALYTVERQAREEVRYRAIMRQKMAEKEKQEK 324

  Fly   324 EDMLRMMAQRAREERAGLRN-----PEAAEPSGSGATGSE------------------------V 359
            |..|.|:||:|||:|.| ||     |..|:|..:..:..|                        .
pombe   325 EQRLFMLAQKAREDRMG-RNAASSGPSHAKPRSTSVSSEERSRSRAGSFSHHSESENEDEDSEAF 388

  Fly   360 RERNDLRAERQRERQRDRNLQRAAPEKRSKL-QKERERDISEQIALGLPAKSAGNGETLFDQRLF 423
            |.|.:||.||:|:.::|..|.|...|||:|| :|:|.||::|::|||| :|.:.:.:|:.|.|||
pombe   389 RRRQELRRERRRQAEKDLRLSRMGAEKRAKLAEKDRPRDVAERVALGL-SKPSMSSDTMIDSRLF 452

  Fly   424 NTTKGMDSGYGDDEAYNVYDKPWR--DSNTLGAHIYRP----SKQADSDNYGGDLDAIVNTKRF- 481
            |...|:.||:.|:::|||||||||  .|:||    |||    |:|.|:   ..:|:.|.:..|: 
pombe   453 NQASGLGSGFQDEDSYNVYDKPWRAAPSSTL----YRPGATLSRQVDA---SAELERITSESRYD 510

  Fly   482 ---VPDKQFSGASKEAAAGQRSGPVEFEKE-EDPFGLDQFLN 519
               ...|:|.|:  :.....|:|||.|||: .||||:|.|||
pombe   511 VLGNAHKKFKGS--DEVVESRAGPVTFEKDIADPFGVDTFLN 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bx42NP_511093.2 SKIP_SNW 181..337 CDD:460666 101/156 (65%)
prp45NP_588213.1 SKIP_SNW 185..338 CDD:460666 101/156 (65%)

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