DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and TCM62

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_009600.2 Gene:TCM62 / 852332 SGDID:S000000248 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:633 Identity:130/633 - (20%)
Similarity:216/633 - (34%) Gaps:167/633 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MSLNPVRVLKNEAQEEKAEMARLSSFIGAIAIGDLVKSTL-GPKGMDKILVATGRN--------- 57
            |..|.:|.|.|  .:.|..:..|.:.|.......:::.|| |.|.::||:.::..|         
Yeast     1 MLRNCLRKLGN--HQTKCSVKTLHTPIYRTKNLQVLRDTLSGIKLLEKIITSSSYNKTLIYEPKY 63

  Fly    58 -------AGH--VEVTNDGATILRAVGVD---------NPAAK-----ILVDMSRVQDEEVGDGT 99
                   :.|  :.:.|....:|.::.||         |...|     :.:.|..:||......|
Yeast    64 KSKPQVVSSHDTMRLHNVMRELLDSLQVDEATNTRLQSNRPRKLGRVGLQLFMDCIQDNLTATST 128

  Fly   100 TSVTVLASELLREAEKLVEQKLHP------------QIIVSGWRQATQVALEALTAAAQDNSS-- 150
            :....|.....:..||.|...:..            :|||.. :......:|.||.::.|:.|  
Yeast   129 SLTCSLLEHYFKYPEKEVTNGIKAGLRYIRDFLAKNKIIVKS-QNDVDALVEQLTMSSSDSQSIK 192

  Fly   151 ------SDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLKG---------SGE--LKS 198
                  :.|.|.:|::.:..               .|...|.|...||         |.|  |:|
Yeast   193 RVLKAINYELFSDDIVRVIN---------------GNKTYDEVDVSKGWKYPAGILDSNEAYLRS 242

  Fly   199 IQIIKKSGGTLGDSFL---DEGFLLDKK---PGVHQPQRIENARILIANTPMDTD---------- 247
            :::..|...::....|   .:|.|.|..   |.:...:::..:.:||.|.....|          
Yeast   243 LELPTKKLVSIDKDMLVLMYDGTLRDANKILPTITYARKLRKSVLLIVNGDCTGDALTSVTINNN 307

  Fly   248 --KIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFINRQLIYN------YPEQLF 304
              |.:...|.|.|...:|.|:.::|.:|.:  ...|.|:..|..    ..||:      .|.::.
Yeast   308 RNKRENNESRIVVLKYSKKANNDLAPQENL--DFIKFLRLPCGY----DSIYSPEYSPLVPSKMC 366

  Fly   305 ADARVMSIEHADFDGIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVMIGEDTLLRFSGVKLGE 369
            ||....|||.......|...|                     :.|:...|.......|    |..
Yeast   367 ADKYYGSIESIKATTGEAFLY---------------------NSIDAEAIPNKVPKSF----LQN 406

  Fly   370 ACTIVIRGATQQILDE----ADRSLHDALCVLAATVKESRIIFGGGCSEALMATAVLK--KAAET 428
            ..|:.|.|..:..:|.    .|..|::.||...|    ...|.|.|.| .|.|...|.  ||.|.
Yeast   407 TVTLSIGGHNEIEIDRRRNAIDNCLNNVLCHGLA----KGFIPGYGIS-LLKAIPGLNELKANEP 466

  Fly   429 PGKEAIAIEAFARALLSLPTAIA-DNA-GYDSAQLVSELRAGHAQGKQTLGLDMELGK------- 484
            .....:.|.|...|:: ||:.:| .|| ||:..: ::.|.||....|     ...:.|       
Yeast   467 NFMTKVGINAVLSAVI-LPSEVAFKNAYGYNYYE-INSLIAGAINEK-----SFPMAKFSPNSEP 524

  Fly   485 VADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPRRRVPDR 532
            |..|:: |..|.::.....|.......|::...:.||.|..::  |:|
Yeast   525 VNTVKD-GNLEPWSKMDSCLAGVETFIELLTSCNTIITCVYKK--PER 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 128/629 (20%)
TCP1_beta 10..527 CDD:239452 125/619 (20%)
TCM62NP_009600.2 PTZ00114 124..492 CDD:185455 85/420 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.