DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and Bbs10

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_082190.1 Gene:Bbs10 / 71769 MGIID:1919019 Length:713 Species:Mus musculus


Alignment Length:583 Identity:102/583 - (17%)
Similarity:213/583 - (36%) Gaps:140/583 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MARLSSFIGAIAIGDLVKS----TLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGVDNPAAK 82
            ||...|...|:.:.::::|    .:||:|..   |...:..|.|.::.||..:|.|:.:::|.|:
Mouse     1 MASQGSVTAALRVAEVLESIANRCVGPEGGQ---VLCTKPTGEVLLSRDGGCLLEALHLEHPLAR 62

  Fly    83 ILVDMSRVQDEEVGDGTTSVTVLASELLR-------------EAEKLVEQKLHPQIIVSGWRQAT 134
            ::|.......::.|||..:..:....|||             .:|.:...:.|       |:...
Mouse    63 MIVACVSSHLKKTGDGAKTFIIFLCHLLRGLHAIGEKGKDSFTSENIQSHERH-------WKNCC 120

  Fly   135 QVALEALTAAAQDNSSS------DEKFRNDLLNIARTTLSSKILHQHK----------------- 176
            |  .::::.|.|...:.      |.......|::..::...:.|.:|.                 
Mouse   121 Q--WKSISQALQTFQTQTLGCIVDRSLSRHYLSVFSSSTEGRKLCRHSLELLLEAYFCGRVGRNN 183

  Fly   177 -DFFANLAVDAVMRLKG--SG----ELKSIQIIKKSGGTLG----DSFLDEGFLLDKKPGVHQPQ 230
             .|.:.|..|.|.:...  ||    ||......:.:.|..|    ||.:.:|.:|.:...::.|.
Mouse   184 HRFISQLMCDYVFKCMACESGVEVFELLDHCFAELNVGVTGLPVSDSRIIDGLVLPRDFSMYCPA 248

  Fly   231 RIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNVFINRQL 295
            ..:...:::  |.:...:....||...::|..:.    .|.:..:.::...::.|.....:...|
Mouse   249 DGDIRMVIV--TEILQPQFSSAGSEFVLNSETQF----QASQCWITDRTKTVMNHLRGQNVKLLL 307

  Fly   296 I-YNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFENPSLVKLGEC---DVIEQVMIGE 356
            . ...|:.:...||:.||.         :..|...|.||..:.  :..|..|   :|..|..|.:
Mouse   308 TSVKQPDLVIYCARLNSIS---------VVECLSAEEVSLVQR--ITGLSPCVLPEVASQCEISD 361

  Fly   357 DTLLRFSG---------VKLG--EAC-----TIVIRGATQQILDEADRSLHDALCVLAATVKESR 405
            .||::|..         |.||  ..|     ::|:.|....::::.:|:.|.|..:|.....:..
Mouse   362 STLVKFCKPLILRSKRYVHLGLISTCAFIPHSMVLCGPVLGLVEQHERAFHGAFKMLRQLFTDLD 426

  Fly   406 IIF----GGGCSEALMATAVLKKAAETPGKEAIA-IEAFARALLSLPTAIADNAGYDSAQLVSEL 465
            :.:    ...|:.:.:|....::...:|..:... |.|.::..|...|.:...:|..::.  :||
Mouse   427 LNYIIQTKQQCNPSPLAYDNSRERNHSPETDKYQDIVAKSKNKLETQTHLEVYSGLGASD--TEL 489

  Fly   466 RAGHAQGKQTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPRRR 528
            |||                          :.::..::..::.|:..||       ::|.|..|
Mouse   490 RAG--------------------------KPWSAHKKTPIAPSQTDEM-------LKCLPPER 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 101/580 (17%)
Bbs10NP_082190.1 Cpn60_TCP1 13..>424 CDD:395068 79/439 (18%)
chap_CCT_alpha <562..703 CDD:274081
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.