DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and cct2

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001006757.1 Gene:cct2 / 448434 XenbaseID:XB-GENE-1006535 Length:535 Species:Xenopus tropicalis


Alignment Length:533 Identity:387/533 - (72%)
Similarity:462/533 - (86%) Gaps:1/533 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MSLNPVRVLKNEAQEEKAEMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDG 67
            :||.||.:.|..|.|||||.|||||||||||||||||||||||||||||:::||:: .|.|||||
 Frog     4 LSLAPVNIFKAGADEEKAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDS-TVTVTNDG 67

  Fly    68 ATILRAVGVDNPAAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQ 132
            ||||:|:|:|||||::|||||:|||:|||||||||||||:|||||||.||.:|:|||.|:|||||
 Frog    68 ATILKAIGIDNPAAQVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEVLVARKIHPQTIISGWRQ 132

  Fly   133 ATQVALEALTAAAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLKGSGELK 197
            |||||.|||..|:.|:.:.:||||.|||||||||||||:|..|||.|:.|||:||:||||||.|:
 Frog   133 ATQVAREALLNASVDHGNDEEKFRCDLLNIARTTLSSKLLTHHKDHFSKLAVEAVLRLKGSGNLE 197

  Fly   198 SIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLA 262
            :|.:|||.||:|.:|:||||||||||.||:||:|||||:||||||.|||||||:|||.::|||.|
 Frog   198 AIHVIKKLGGSLTESYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTA 262

  Fly   263 KIADLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCT 327
            |:|::|:||||||||||::||||..|.||||||||||||||||.|.||:||||||.|:||||..|
 Frog   263 KVAEIELAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFATAGVMAIEHADFAGVERLALVT 327

  Fly   328 GGEIVSTFENPSLVKLGECDVIEQVMIGEDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHD 392
            ||||.|||::|.|||||.|.:||:||||||.|:.||||.:|||||||:|||||||||||:|||||
 Frog   328 GGEIASTFDHPELVKLGTCKLIEEVMIGEDKLIHFSGVAMGEACTIVLRGATQQILDEAERSLHD 392

  Fly   393 ALCVLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYD 457
            ||||||.|||::|.::||||||.|||.||.:.|..|||||::|:|:||:||..|||.||||||||
 Frog   393 ALCVLAQTVKDTRTVYGGGCSEMLMAHAVTELAIRTPGKESVAMESFAKALRMLPTIIADNAGYD 457

  Fly   458 SAQLVSELRAGHAQGKQTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIR 522
            ||.|||:|||.|::||.|.||||:.|.:.::.||||||||.||||||:|||||||:||||||||:
 Frog   458 SADLVSQLRAAHSEGKSTYGLDMKNGTIGEMGELGITESFQVKRQVLLSASEAAEVILRVDNIIK 522

  Fly   523 CAPRRRVPDRGYC 535
            .|||:||||...|
 Frog   523 AAPRKRVPDHHPC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 383/526 (73%)
TCP1_beta 10..527 CDD:239452 377/516 (73%)
cct2NP_001006757.1 TCP1_beta 11..527 CDD:239452 377/516 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 617 1.000 Domainoid score I182
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4696
Inparanoid 1 1.050 631 1.000 Inparanoid score I833
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D205390at33208
OrthoFinder 1 1.000 - - FOG0004903
OrthoInspector 1 1.000 - - oto102518
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3458
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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