DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and CCT1

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster


Alignment Length:531 Identity:185/531 - (34%)
Similarity:302/531 - (56%) Gaps:42/531 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGVDNPAAKILVDMS 88
            |..:.:.|::|.::|||:|||.|:||:||   .:.|.|.||||||||||.:.|::||||:||:::
  Fly    21 RTQNVMAALSISNIVKSSLGPVGLDKMLV---DDIGDVTVTNDGATILRLLEVEHPAAKVLVELA 82

  Fly    89 RVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWR----QATQVALEALTAAAQDNS 149
            ::||||||||||||.:||:|||:.|::||:||:||..|:||:|    :|.:...|.|||..    
  Fly    83 QLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPV---- 143

  Fly   150 SSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLK-------GSGELKSIQIIKKSGG 207
              ||..|:.|:|||:|::||||:....:||:.:.|||...:|       .:..:|:|.::|..|.
  Fly   144 --DELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINVLKAHGK 206

  Fly   208 TLGDSFLDEGFLLDKKPGVHQ-PQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAE 271
            :..:|.|..|:.|:......| |::|.||:|...:..:...|:|: |..:.::...|:..:...|
  Fly   207 SARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKM-GVQVLINDPDKLEAIRARE 270

  Fly   272 KEKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIVSTFE 336
            .:..||:::.||....||.:....:.:...:.|.:|..|::.......::.:|..||...:::..
  Fly   271 LDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFITSLT 335

  Fly   337 N--------PSLVKLGECDVIEQVMIGEDTLLRFSGVKLGEACTIVIRGATQQILDEADRSLHDA 393
            |        .|:|  ||...:.|..|.:|.|:...|.|...|.:|::||......||.:||:|||
  Fly   336 NMDGEESFDASMV--GEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDA 398

  Fly   394 LCVLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDS 458
            |||:...::..:::.||||.||.::..:...|.....:|.:||..||::||.:|..::.||..|:
  Fly   399 LCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAAKDA 463

  Fly   459 AQLVSELRAGHAQGKQT---------LGLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMI 514
            ..||::||:.| ...||         .|||:..|.|.|.::.|:.|....|.:.|..|:|||..|
  Fly   464 TDLVAKLRSYH-NSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITI 527

  Fly   515 LRVDNIIRCAP 525
            ||:|::|:..|
  Fly   528 LRIDDMIKLNP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 185/531 (35%)
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 184/529 (35%)

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