DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and cct4

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_956877.1 Gene:cct4 / 393555 ZFINID:ZDB-GENE-040426-1421 Length:533 Species:Danio rerio


Alignment Length:530 Identity:171/530 - (32%)
Similarity:293/530 - (55%) Gaps:29/530 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LKNE----AQEEKAEMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATIL 71
            :||:    ...:|....|.|:.....|:.|.::::|||||||| ::..|:  |.|.:||||||||
Zfish    11 IKNKGSAYVDRDKPAQIRYSNINAGKAVADAIRTSLGPKGMDK-MIQDGK--GDVTITNDGATIL 72

  Fly    72 RAVGVDNPAAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQV 136
            :.:.|.:||||::|::|:.||.|.|||||||.|:|..||....||:::.:||.||...:::|...
Zfish    73 KQMQVLHPAAKMMVELSKAQDIEAGDGTTSVVVIAGALLDACAKLLQKGIHPTIISESFQKAVDK 137

  Fly   137 ALEALTAAAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRL-----KGSGEL 196
            .:|.||:.:.....||   |..|||.|.|:|.||::.|:....|.::|||||::     ..|.:|
Zfish   138 GVEVLTSISTPLLLSD---RESLLNSASTSLCSKVVSQNSSLLAPMSVDAVMKVIDPATATSVDL 199

  Fly   197 KSIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQPQRIENARILIAN---TPMDTDKIKVFGSSIKV 258
            :.|.::||.|||:.|..|.:|.:|.::.......|:|.|:|.:..   :|..||    ..:.|.|
Zfish   200 RDINVVKKLGGTIDDCELVDGMVLTQRVASTGVSRVEKAKIGLIQFCLSPPKTD----MDNQIVV 260

  Fly   259 DSLAKIADLEMAEKEKMKEKVDKILKHKCNVF-----INRQLIYNYPEQLFADARVMSIEHADFD 318
            ...|::..:...|:..:...|.::.|..|.|.     |.|..:.:.........::|.|:..:.:
Zfish   261 SDYAQMDRVLREERAYILNLVKQVKKAGCTVLLIQKSILRDALSDLALHFLNKMKIMVIKDIERE 325

  Fly   319 GIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVMI-GEDTLLRFSG-VKLGEACTIVIRGATQQ 381
            .||.:....|.:.::..:..:...||..:::|:|.: |...|::.:| ...|:..:||:||:.:.
Zfish   326 EIEFICKTIGTKPIAHIDQFTPEMLGSAELVEEVSLDGSGKLVKITGCASPGKTVSIVVRGSNKL 390

  Fly   382 ILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLSL 446
            :::||:||:||||||:...||:..:|.|||..|..:|..:.:.|....|.||..:.|:|.||..:
Zfish   391 VIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLAEYARSLGGMEAYCVRAYADALEVI 455

  Fly   447 PTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAA 511
            |:.:|:|||.:....|:|||..||||:.|.|:::..|.::::.|..:.:...|....|..|:|..
Zfish   456 PSTLAENAGLNPISTVTELRNRHAQGETTAGINVRKGGISNILEELVVQPLLVSISALTLATETV 520

  Fly   512 EMILRVDNII 521
            ..||::|:::
Zfish   521 RSILKIDDLV 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 171/530 (32%)
cct4NP_956877.1 TCP1_delta 20..532 CDD:239454 169/521 (32%)

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