DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and CCT8

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:497 Identity:144/497 - (28%)
Similarity:249/497 - (50%) Gaps:26/497 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VKSTLGPKGMDKILVATGRNAGHVE---VTNDGATILRAVGVDNPAAKILVDMSRVQDEEVGDGT 99
            ::|..||.||:|:::      .|:|   ||:|..||:|.:.|::||||::|..|::||.||||||
  Fly    43 MRSAYGPNGMNKMII------NHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGT 101

  Fly   100 TSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKFRN--DLLNI 162
            ..|.|||..||..||:|:...:....|..|:.:|.:.|||.|....   |...|.:||  .:..:
  Fly   102 NFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLV---SHKIEDYRNVEKVKEV 163

  Fly   163 ARTTLSSKILHQHKDFFANLAVDAVMRL---KGSGELKSIQIIKKSGGTLGDSFLDEGFLLDKKP 224
            .||::.||...| :||..:|...|.:.:   :|:..:.:|:|.|..|..|..|.:..|.:. |:.
  Fly   164 LRTSIMSKQYGQ-EDFLNDLVSKACVSILPDEGTFNVDNIRICKILGSGLTKSEVVRGMVF-KRF 226

  Fly   225 GVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNV 289
            ........|.|:|:|.:.|:|..:.:..| ::.:.|..::......|:..::.::..|......|
  Fly   227 VEGDVTYAEKAKIVIFSCPVDIIQTETKG-TVLIKSADELLSFSSGEESLLESQIKAIADAGVKV 290

  Fly   290 FINRQLIYNYPEQLFADARVMSIE-HADFDGIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVM 353
            .:....:.:..........:|::. ::.|| :.||:......::.....||..:||.||.:....
  Fly   291 VVAGGKVGDMALHFLNKYGLMAVRLNSKFD-LRRLSRSVNATVLPRITTPSQEELGYCDKVCIEE 354

  Fly   354 IGEDTLLRFSGV-KLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALM 417
            :|:.|::.|... |.....|:||||||...:|:.:|:|.||:.......::.|.:.|.|.:|..:
  Fly   355 LGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIEL 419

  Fly   418 ATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGH-AQGKQTLGLDME 481
            ||.:...|...||.:..|:..||.||...|.|:|:|:|.:..::|::|...| .:..:|:|.|:|
  Fly   420 ATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIE 484

  Fly   482 LGKVA--DVRELGITESFAVKRQVLMSASEAAEMILRVDNII 521
            ..|.:  |..:..:.:.:..|...|..|..||..||:||.||
  Fly   485 AEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQII 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 144/497 (29%)
TCP1_beta 10..527 CDD:239452 144/497 (29%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 144/497 (29%)
Cpn60_TCP1 40..529 CDD:278544 144/497 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453428
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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