DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and CCT8

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:497 Identity:144/497 - (28%)
Similarity:249/497 - (50%) Gaps:26/497 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VKSTLGPKGMDKILVATGRNAGHVE---VTNDGATILRAVGVDNPAAKILVDMSRVQDEEVGDGT 99
            ::|..||.||:|:::      .|:|   ||:|..||:|.:.|::||||::|..|::||.||||||
  Fly    43 MRSAYGPNGMNKMII------NHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGT 101

  Fly   100 TSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKFRN--DLLNI 162
            ..|.|||..||..||:|:...:....|..|:.:|.:.|||.|....   |...|.:||  .:..:
  Fly   102 NFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLV---SHKIEDYRNVEKVKEV 163

  Fly   163 ARTTLSSKILHQHKDFFANLAVDAVMRL---KGSGELKSIQIIKKSGGTLGDSFLDEGFLLDKKP 224
            .||::.||...| :||..:|...|.:.:   :|:..:.:|:|.|..|..|..|.:..|.:. |:.
  Fly   164 LRTSIMSKQYGQ-EDFLNDLVSKACVSILPDEGTFNVDNIRICKILGSGLTKSEVVRGMVF-KRF 226

  Fly   225 GVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNV 289
            ........|.|:|:|.:.|:|..:.:..| ::.:.|..::......|:..::.::..|......|
  Fly   227 VEGDVTYAEKAKIVIFSCPVDIIQTETKG-TVLIKSADELLSFSSGEESLLESQIKAIADAGVKV 290

  Fly   290 FINRQLIYNYPEQLFADARVMSIE-HADFDGIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVM 353
            .:....:.:..........:|::. ::.|| :.||:......::.....||..:||.||.:....
  Fly   291 VVAGGKVGDMALHFLNKYGLMAVRLNSKFD-LRRLSRSVNATVLPRITTPSQEELGYCDKVCIEE 354

  Fly   354 IGEDTLLRFSGV-KLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALM 417
            :|:.|::.|... |.....|:||||||...:|:.:|:|.||:.......::.|.:.|.|.:|..:
  Fly   355 LGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIEL 419

  Fly   418 ATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGH-AQGKQTLGLDME 481
            ||.:...|...||.:..|:..||.||...|.|:|:|:|.:..::|::|...| .:..:|:|.|:|
  Fly   420 ATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIE 484

  Fly   482 LGKVA--DVRELGITESFAVKRQVLMSASEAAEMILRVDNII 521
            ..|.:  |..:..:.:.:..|...|..|..||..||:||.||
  Fly   485 AEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQII 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 144/497 (29%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 144/497 (29%)

Return to query results.
Submit another query.