DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and Mkks

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001008354.1 Gene:Mkks / 311456 RGDID:1308814 Length:570 Species:Rattus norvegicus


Alignment Length:604 Identity:128/604 - (21%)
Similarity:221/604 - (36%) Gaps:144/604 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KNEAQEEKAEMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRN--AGHVEVTNDGATILRAV 74
            |.|....:...:.||...|.||      |..||.|..|.|    .|  .|.|..|:..:.:||.:
  Rat    13 KTEPLTSERVRSTLSVLKGIIA------SCYGPSGRLKQL----HNGLGGCVCTTSQSSALLRNL 67

  Fly    75 GVDNPAAKILVDMSRVQDEE--VGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVA 137
            .|.:|..|:|.  |.||:..  ..|......:|...|:...:::   .|.|...:...:....::
  Rat    68 SVTHPILKVLT--SSVQNHVCCFSDCGLFTAILCCNLIENIQRI---GLTPTTAIKLNKYLLGLS 127

  Fly   138 LEAL-TAAAQDNSSSDEKFRNDLLNIARTTLSSK----ILHQHKDFFANLAVDA-VMRLKGSGEL 196
            :..| :.|.......|.:..:..||:..:.|:||    :..:..|....|.:.| ::.:..|.|.
  Rat   128 ISYLKSEACSCRIPVDFRSTHTFLNLVHSILTSKPACMLTRKEIDHIGALILKAFLLTIPESAEE 192

  Fly   197 -----KSIQIIKKSGGTLGDSFLDEGFLLDKKPGVHQPQRIENARILIANTPMDTDKIKVFGSSI 256
                 ||| |:...|..:.||.:..|.|::...        ...|.|:......|.::.:|.:|:
  Rat   193 RMVLGKSI-IVPLKGQQVTDSTVLPGLLIEASE--------VQLRRLLPTQKSSTLRVALFCASL 248

  Fly   257 KVD---------------SL--AKIADLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNYPEQLF 304
            ..|               ||  |.:..|....::.:.:.||.:|   |...|:..|     :|..
  Rat   249 SGDFSNAGEGTLVVHYQVSLENAVLEQLLNLGRQLVSDHVDLVL---CQKVIHPSL-----KQFL 305

  Fly   305 ADARVMSIEHADFDGIERLAYCTGG-------EIVSTFENPSLVKLGECDVIEQVMIGEDTLLRF 362
            ::.::::|:......:|.|:..||.       .||||       ..|....:.....|..   .|
  Rat   306 SEHQIIAIDRVGVTLMEPLSKVTGATPIGSLYPIVST-------TYGSVKDVRSARFGSK---YF 360

  Fly   363 SGVKLGEA--CTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALMAT------ 419
            ..:...||  |::::........:|...:...|:.||..|:||..::.||||.|..:|.      
  Rat   361 FHLLPNEATICSLLLCSRNDTAWEELKLTCQTAMHVLQLTIKEPWVLLGGGCVETHLAAYIRHKV 425

  Fly   420 -----AVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGH---------- 469
                 |:::....:..:..||.|||..||.|...::.    :|..:::.:::.||          
  Rat   426 HNEAEAIVRDDGCSQAELHIATEAFCSALESAAVSLE----HDGGEILIDMKYGHFWSCPADSAS 486

  Fly   470 -AQGKQTL-----GL---DMEL-----------------------GKVADVRELGITESFAVKRQ 502
             .....||     ||   ..||                       |.|:::    ..:||..|..
  Rat   487 VGNWPDTLSRCGCGLYNSQEELSWSVLRSTYHPFAPQTCLPQAASGSVSNL----TVDSFTAKLS 547

  Fly   503 VLMSASEAAEMILRVDNII 521
            .|..|.|.|.:||.:..:|
  Rat   548 GLQVAVETANLILDLSYVI 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 128/604 (21%)
MkksNP_001008354.1 Cpn60_TCP1 29..569 CDD:395068 124/588 (21%)

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