DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT2 and Cct4

DIOPT Version :10

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_877966.1 Gene:Cct4 / 29374 RGDID:727937 Length:539 Species:Rattus norvegicus


Alignment Length:516 Identity:170/516 - (32%)
Similarity:292/516 - (56%) Gaps:19/516 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EKAEMARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGVDNPAAK 82
            :|....|.|:...|.|:.|.::::|||||||| ::..|:  |.|.:||||||||:.:.|.:|||:
  Rat    28 DKPAQIRFSNISAAKAVADAIRTSLGPKGMDK-MIQDGK--GDVTITNDGATILKQMQVLHPAAR 89

  Fly    83 ILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQD 147
            :||::|:.||.|.|||||||.::|..||....||:::.:||.||...:::|.:..||.||..::.
  Rat    90 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRP 154

  Fly   148 NSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRL-----KGSGELKSIQIIKKSGG 207
            ...||   |..|||.|.|:|:||::.|:....:.::|:|||::     ..|.:|:.|:|:||.||
  Rat   155 VQLSD---RETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGG 216

  Fly   208 TLGDSFLDEGFLLDKKPGVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEK 272
            |:.|..|.||.:|.:|.......|:|.|:|.:....:...|..: .:.|.|...|::..:...|:
  Rat   217 TIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDM-DNQIVVSDYAQMDRVLREER 280

  Fly   273 EKMKEKVDKILKHKCNVF-----INRQLIYNYPEQLFADARVMSIEHADFDGIERLAYCTGGEIV 332
            ..:...|.:|.|..|||.     |.|..:.:.........::|.::..:.:.||.:....|.:.|
  Rat   281 AYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPV 345

  Fly   333 STFENPSLVKLGECDVIEQVMI-GEDTLLRFSG-VKLGEACTIVIRGATQQILDEADRSLHDALC 395
            :..:..:...||..::.|:|.: |...|.:.:| ...|:..|||:||:.:.:::||:||:|||||
  Rat   346 AHIDQFTPDMLGSAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALC 410

  Fly   396 VLAATVKESRIIFGGGCSEALMATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQ 460
            |:...||:..:|.|||..|..:|..:.:.:....|.|:..:.|||.|:..:|:.:|:|||.:...
  Rat   411 VIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPIS 475

  Fly   461 LVSELRAGHAQGKQTLGLDMELGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNII 521
            .|:|||..||||::|.|:::..|.::::.|..:.:...|....|..|:|....||::|:::
  Rat   476 TVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 170/516 (33%)
Cct4NP_877966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 170/516 (33%)
TCP1_delta 25..538 CDD:239454 170/516 (33%)

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