DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT2 and hspd1

DIOPT Version :9

Sequence 1:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_851847.1 Gene:hspd1 / 282676 ZFINID:ZDB-GENE-021206-1 Length:575 Species:Danio rerio


Alignment Length:570 Identity:133/570 - (23%)
Similarity:236/570 - (41%) Gaps:104/570 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ARLSSFIGAIAIGDLVKSTLGPKGMDKILVATGRNAGHVEVTNDGATILRAVGV----DNPAAKI 83
            ||.....|...:.|.|..|:||||...|:   .::.|..:||.||.|:.:::.:    .|..||:
Zfish    36 ARALMLQGVDLLADAVAVTMGPKGRTVII---EQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKL 97

  Fly    84 LVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDN 148
            :.|::...:||.|||||:.||||..:.:|....:.:..:|..|    |:...:|:|.:.:..:.|
Zfish    98 VQDVANNTNEEAGDGTTTATVLARAVAKEGFDTISKGANPVEI----RRGVMMAVEEVISELKKN 158

  Fly   149 S---SSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLKGSGELKSIQIIKKSGGTLG 210
            |   ::.|    ::..:|  |:|:    .......|:..:|:.::...|     .|..|.|.||.
Zfish   159 SKPVTTPE----EIAQVA--TISA----NGDTEVGNIISNAMKKVGRKG-----VITVKDGKTLH 208

  Fly   211 DSF-LDEGFLLDKKPGVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIAD-LEMAEKE 273
            |.. :.||...|:  |...|..|..|:    ....:.....|..|..|:.|:..|.. ||:|.:.
Zfish   209 DELEIIEGMKFDR--GYISPYFINTAK----GQKCEFQDAYVLLSEKKISSVQSIVPALEIANQH 267

  Fly   274 K-----MKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADF-----DGIERLAYCTG 328
            :     :.|.||.  :....:.:||         |....:|::::...|     :.::.:|..||
Zfish   268 RKPLVIVAEDVDG--EALSTLVLNR---------LKVGLQVVAVKAPGFGDNRKNQLQDMAVSTG 321

  Fly   329 ------------------------GEIVSTFENPSLVK-LGECDVIEQVM--IGED--------- 357
                                    ||::.|.::..|:| .|:...||:.:  |.|.         
Zfish   322 GTVFGDEAMGLALEDIQAHDFGKVGEVIVTKDDTMLLKGRGDASAIEKRVNEIAEQLESTNSDYE 386

  Fly   358 -TLLRFSGVKLGEACTIVIRGATQQI-LDEADRSLHDALCVLAATVKESRIIFGGGCSEALMATA 420
             ..|.....||.:...::..|.|..: ::|....:.|||....|.|:|. |:.||||: .|....
Zfish   387 KEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDRVTDALNATRAAVEEG-IVPGGGCA-LLRCIP 449

  Fly   421 VLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGHAQGKQTLGLDMELGKV 485
            .|.........:.|.|:...|:|......||.|||.:.:.:|.::    .|....:|.|...|:.
Zfish   450 ALDNIKPANADQKIGIDIIRRSLRIPAMTIAKNAGVEGSLVVEKI----LQSSTEIGYDAMNGEY 510

  Fly   486 ADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPR--RRVPDRG 533
            .::.|.||.:...|.|..|:.|:..|.::...:.::...|:  :.:|..|
Zfish   511 VNMVERGIIDPTKVVRTALLDAAGVASLLSTAEAVVTEIPKEEKEMPAGG 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 131/565 (23%)
TCP1_beta 10..527 CDD:239452 131/562 (23%)
hspd1NP_851847.1 PTZ00114 24..558 CDD:185455 131/566 (23%)
GroEL 28..548 CDD:239460 130/556 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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